Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00874 AAGAACCCCTTTTTGTCCCGGCCCCCAAACGCGTAAACCATCATTCCTTGTTGTTTACAGTGAAAAGCCTTGCCGGAGGTCCGAATTTTCCGGGAAACTCGACTTCAGGATGGTTTCCCCGGAAAACTCCAACTGGCTTTTCGAATATCCCTTGATTGAAGATATCTCTGTACCAGATGGGAATTTTACTGTCCCAGCTTCTGGTTTTAGCTGGCCAGCACAGGCCTTGATTGGCTCTTCGAATGGCAGTGTTGAAATGGATGGTGCTTTGGGGGATTCTGATTGCCTTAAAGAATCTGGCTCAAAGAAGAGGGGTAGATCTGATTCTTGTGCTGCTTCTAGCTCCAAGGCATGCCGAGAGAAGTTGCGCAGGGATAGGTTGAATGACAAGTTTCTTGAATTAGGCTCCATTTTGGAGCCTGGACGGCCTCCCAAAACAGATAAGGCTGCCGTTCTGATTGATGCGGTGCGAATGGTGACTCAGTTACGGGGTGAAGCCCAGAAGTTGAAAGACTCAAATATGAATCTTCAAGAGAAGATCAAAGAGTTAAAGGCAGAGAAGAATGAACTTCGTGACGAGAAACAGAGGCTCAAGTTGGAGAAAGAAAAGTTGGAGCAGCAGCTGAAAGCGGTTAATGCACAGCCTGGTTTCTTGCCTCCCCCTCCTGCAATTCCTGCTGCTTTCACTGCACAAGGCCAACCTCCTGGCAGCAAGTTGGTGCCTTTGATTGGTTATCCAGGAGTTGCCATGTGGCAGTTTATGCCCCCAGCTGCAGTGGATACCTCCCAGGACCATGTACTCCGTCCACCAGTTGCCTAAGTTGGCACTTTACAATCATTTGGGCTTCCATTCCGGCCCGAAAATTGTATTCATTTTCCCAACCTTTAATTGTCTATGTAGTTTTCAACCAAGTGTTCTAACCGAACCTGGCGGTGGCTTGACTGTACTGGGCATCTGATACTGTTATGAAGTAATGCTGGTATTTGCATGTAAATGTTTAATAAGCTTGTCAAGCTAATTATGCTCCAGTCTTGACTATCTTCACTGGGTTTGAG 1056 0.4697 MVSPENSNWLFEYPLIEDISVPDGNFTVPASGFSWPAQALIGSSNGSVEMDGALGDSDCLKESGSKKRGRSDSCAASSSKACREKLRRDRLNDKFLELGSILEPGRPPKTDKAAVLIDAVRMVTQLRGEAQKLKDSNMNLQEKIKELKAEKNELRDEKQRLKLEKEKLEQQLKAVNAQPGFLPPPPAIPAAFTAQGQPPGSKLVPLIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00874 236 Pfam Helix-loop-helix DNA-binding domain 79 126 IPR011598 GO:0046983
Bach13g00874 236 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 77 145 IPR036638 GO:0046983
Bach13g00874 236 MobiDBLite consensus disorder prediction 52 79 - -
Bach13g00874 236 CDD bHLH_AtILR3_like 80 155 - -
Bach13g00874 236 Coils Coil 123 178 - -
Bach13g00874 236 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 126 IPR011598 GO:0046983
Bach13g00874 236 PANTHER BHLH TRANSCRIPTION FACTOR 5 236 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Bach13g00874 236 FunFam Transcription factor bHLH34 66 124 - -
Bach13g00874 236 Gene3D - 78 155 IPR036638 GO:0046983
Bach13g00874 236 SMART finulus 81 132 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00874 Bach-Chr13 14054581 14057625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00874 1 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 72.385 1.82e-120 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach13g00874 HLH 2.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00874 - - mof:131145122 360.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g00874 13 14054581 14057625 Bach13g00874 13 14054581 14057625 ECH