Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00870 ATGGCTATTCAAGTATTTATGGGTTTCAAAAGGGCTAGCTTTTGCATTCTTTCGGTTATTCTTCTTACATCAGCAGTTAGTTTGAAAGACAGGGATGAAACACAGGAAGAGTTTCTTAGCCAACTACTGGATCCAACGTCTGGACTGTTAGATGAGGACACGGCAGAGCTATTATGGACCAGTTGCAGGGCAGATTTGATTCATTTAGAGAAAGAAGTTGAGGATCTTAACTTATGCTTCCCAGAGGAATCATCCAGTTGCACAGATGTAATGAATCCAGAGATTCGATCATTAGTGCGAGACAACTTCCAGAAGTTAATTATTGCTCACCATCCTCAGTTGAGGCAAATTCTTCTTCAGTGTTTGAGAAAGAATAATTTCCCATTCCAGGTTTCTGGAGAAGATGATGACTCCAAGATTTGGCTTTCCACTTTTCTTGAATTGTTTTTCCCTAGATCCAATGTTCGTAGGAGAAATTTGGGTGTTGAATTACCTCAGCGCAGTCCAAAACTATCCCCTCCTTCGACACGGCCCAGCCCTCGAGTTCTCAAATCCAAGTCGTCGAGTACTAAAGGAAAGGCTGATAAGAAAAGTAATCACGAACAAGTGGTTATTCTTGCTGTAGTTATAACTGCATCAGTGACATTTTTAGTTGCAGCTCTGCTCTTTTTATGCTGTAGTATGTTTTGTAGGACTGGCCGAGACAGAAAAAATGATGAGAAGCCGCTTCTCAGCCTGAGCATGAGTGACTACTCTGTTGGTTCTTCGAACAATGGTATTGGAAATTCAATAAAAGAGGAGAAATTTGGGCTTCAATCATCTAGTAGTAACAATTCATTCAACCAACAAAAACCCTCATCTTTAGATGGTAATATTCTTACCACTGTTCAGGAAAGTGCATCAGTTGGAGCCAATGCTGCTGCCAGGCCATCAATGGAATTGAAACCTCCTCCTGGGAGGGTAGTCCCTTCTGGATTGCTTCCTTTGAAACCTCCTCCTGGTAGGCCAGATCTCCTTCCCCCTGAGCCACCTTCTTTTGGTCATGCTGCTGCTCCCCCTCCTCCTCCTCCACCTCCTGCACACCCGCAAACCGTGAAGCCTCATCCTAATGTTGGGGGCACTCCACCTCCTGGAGCTCCTCCACCACCACCACCTCCAGGACCACATGGTTCCAAACCTGGTCCTCGTCCACCAGGACCACCACCACCCCCAGCACCACGGGGTGCCAAATCAGGTCCTCGACTTCCTCAACCAATTGGCCGGAAGGTGGCTCGACCTTTAGCTGGTGGACTTAAAGCTGCTGAAAATGTAGATGATGATTCAGAAGGTGAAGCTGGTGCTACTAAAACCAAGCTTAAACCTTTTTTCTGGGATAAGGTTCAAGCCAACTCAGATCAGGCAATGGTTTGGAATCAACTCAAAGCAGGATCATTCCAGTTTAATGAAGAGATGATAGAGTCACTCTTTGGCTATAGTGCTGTGGATAAAAACAAAGTTGAACGCAAGAAAGACTCTTCCTCCCAAGACCATACTCCTCAGTATATCCAGATCATTGATGTGAAGAAATCACAAAACTTGTCAATTTTATTGAAAGCATTAAATGTGACAAGGGAAGAAGTTTGTGATGCGCTTCTTGAAGGAAACGAGCTCCCATCAGAATTCCTTCAGACTTTGCTGAAGATGGCACCAACATCAGAGGAAGAACTTAAGCTTAGACTATATAATGGTCAACTATCTCTACTTGGGCCTGCTGATCGGTTCCTCAAAGCCCTGGTTGACATTCCCTTTGCTTTTAAACGATTGGAAGCACTGCTTTTTATGGGTACACTTCAAGAAGAGCTCTCTTCTACTATGGAATCCTTTGATATTTTAGAGATTGCTAGTAAAGAATTAAGAAGCAGCCGTCTTTTCCTCAAGCTTCTGGAAGCTGTTCTCAAAACTGGAAACCGGATGAATGATGGGACATTCCGTGGTGGTGCAATGGCATTTAGACTTGATACACTTCTGAAATTGTCGGATGTAAAAGGTGTTGATGGCAAGACTACCCTCTTACACTTTGTTGTTCAAGAGATAAGCCGCGGTGAGGGTGTGAGAGCTGCCCGTATGGCGAGAGAGAGCCGGAGTTTCTCTAGTATAAAAACAGAGGACCTTCTTGAGGACATCACCCATGAATCGGATGAACACTATCGTGAACTTGGTCTTCAGGTGGTTTCACGGTTGAGCAGTGAACTTGAGAATGTCAAAAAAGCAGCAGCTATAGACGCAGACAGCTTAACAAGTAATACTGCCAAACTCGGCCATGGTCTCCTTAAAACCAGAGACTTTGTAAACACAGACCTCAAAGGCGTAGAGGGAGATAGAGGGTTTTATCAAACTGTTAAGAGTTTTGTGGAAAGTGCTGAGGATGATGTCAAAAAGCTGCTGGCAGAAGAGCAAAAAATCATGGCTTTAGTAAAGAGTACTGGTGACTATTTTCATGGGAATGCTGGGAAGGATGAGGGCTTACGTTTATTTGTCATAGTGCGAGACTTCCTAGTAATGTTGGATAAGGTATGCAAGGAAGTGAAAGAGAGAAATGCTCAGAAGAAGCCAGCAAAACCCCAGAAACCAGAGAGCAAAAATAAAGCATCAGCAGCTACCGATCGTAGACCACCTTCCGATCTTCGTAACCGCCTCTTTCCACAAATTGCAGATCGGAGGATGGATGACTTTAGTTCAGATGATGACAGCCCGTAGATGAAGAGGGGTCGTTTACTACGTTTGTTTCTTCTTCGAGGGTGGAAATGGCATGAGACTAATACTTCACAAACCAAAAATGTCTTGTGTACTATACATACTTGGCTGGAGTTTACCTCAAACGCTGCTATTATAACCATCATTGGGATAAGCTTCTAGTTCATGAGTAACAGCCACTTCAGGCTGCAGTAGTTGTAGAATTTTGATGGTTTATTATTTACAATTCTTT 2965 0.4371 MAIQVFMGFKRASFCILSVILLTSAVSLKDRDETQEEFLSQLLDPTSGLLDEDTAELLWTSCRADLIHLEKEVEDLNLCFPEESSSCTDVMNPEIRSLVRDNFQKLIIAHHPQLRQILLQCLRKNNFPFQVSGEDDDSKIWLSTFLELFFPRSNVRRRNLGVELPQRSPKLSPPSTRPSPRVLKSKSSSTKGKADKKSNHEQVVILAVVITASVTFLVAALLFLCCSMFCRTGRDRKNDEKPLLSLSMSDYSVGSSNNGIGNSIKEEKFGLQSSSSNNSFNQQKPSSLDGNILTTVQESASVGANAAARPSMELKPPPGRVVPSGLLPLKPPPGRPDLLPPEPPSFGHAAAPPPPPPPPAHPQTVKPHPNVGGTPPPGAPPPPPPPGPHGSKPGPRPPGPPPPPAPRGAKSGPRLPQPIGRKVARPLAGGLKAAENVDDDSEGEAGATKTKLKPFFWDKVQANSDQAMVWNQLKAGSFQFNEEMIESLFGYSAVDKNKVERKKDSSSQDHTPQYIQIIDVKKSQNLSILLKALNVTREEVCDALLEGNELPSEFLQTLLKMAPTSEEELKLRLYNGQLSLLGPADRFLKALVDIPFAFKRLEALLFMGTLQEELSSTMESFDILEIASKELRSSRLFLKLLEAVLKTGNRMNDGTFRGGAMAFRLDTLLKLSDVKGVDGKTTLLHFVVQEISRGEGVRAARMARESRSFSSIKTEDLLEDITHESDEHYRELGLQVVSRLSSELENVKKAAAIDADSLTSNTAKLGHGLLKTRDFVNTDLKGVEGDRGFYQTVKSFVESAEDDVKKLLAEEQKIMALVKSTGDYFHGNAGKDEGLRLFVIVRDFLVMLDKVCKEVKERNAQKKPAKPQKPESKNKASAATDRRPPSDLRNRLFPQIADRRMDDFSSDDDSP 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00870 911 SMART it6_source 442 863 IPR015425 -
Bach13g00870 911 MobiDBLite consensus disorder prediction 857 911 - -
Bach13g00870 911 Gene3D Formin, FH2 domain 448 884 IPR042201 -
Bach13g00870 911 MobiDBLite consensus disorder prediction 321 411 - -
Bach13g00870 911 MobiDBLite consensus disorder prediction 164 196 - -
Bach13g00870 911 Coils Coil 797 817 - -
Bach13g00870 911 PRINTS Proline rich extensin signature 377 402 - -
Bach13g00870 911 PRINTS Proline rich extensin signature 340 357 - -
Bach13g00870 911 PRINTS Proline rich extensin signature 317 333 - -
Bach13g00870 911 PRINTS Proline rich extensin signature 172 184 - -
Bach13g00870 911 MobiDBLite consensus disorder prediction 303 421 - -
Bach13g00870 911 ProSiteProfiles Formin homology-2 (FH2) domain profile. 442 874 IPR015425 -
Bach13g00870 911 Pfam Formin Homology 2 Domain 446 848 IPR015425 -
Bach13g00870 911 PANTHER FORMIN-RELATED 143 907 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Bach13g00870 911 SUPERFAMILY Formin homology 2 domain (FH2 domain) 381 863 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00870 Bach-Chr13 14033155 14039806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00870 419 902 FH2 protein (formin) Gene Family AT5G54650 66.324 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00870 - - pcin:129315422 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g00870 13 14033155 14039806 Bach9g00635 9 4390568 4395659 BWGD
Bach13g00870 13 14033155 14039806 Bach13g00870 13 14033155 14039806 ECH