Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00863 ATGAGAGCAGCAGTGGCGGCGCCTCGAGGTTTAAGGCGGCTATTCTCAACCTCTACAACTTCGACACCGTCGTTTATACCTCCCCCAGCCAGCACTACAGCTCCTGCTCGAGAGACGGCCGAGCCCAACACCAACCTCTTCGTCTCTGGGCTTAGCAAGCGTACTACTTCAGAAGGGCTAAGGGAAGCATTTTCCAAATTTGGTGAACTAGTTCATGCTAGAGTGGTGACAGATAGAGCATCAGGTTACTCTAAGGGATTTGGTTTTGTAAAGTATGCTACTATAGAAGAGGCTGCAAAGGGCATTGAAGGCATGGATGGCAAGTTCCTTGATGGATGGGTTATATTTGCTGAGTACGCAAGACCGAGACCACCACCTGGACAGCCTCAAAATAACACGTCCCTTCCTACGTATGGTCGGTATTGATTCATACTATCTATTATTTATAGGAAACATTCTTAAGACTTTAACTTAATTTACCAATCAAGTTGCAACCTGGAATCACTAGTATTGTTGTAATGCTACAAGTCTGTTTATGGAAACAATATATAAACATATTTTGGGTCGGTA 570 0.4439 MRAAVAAPRGLRRLFSTSTTSTPSFIPPPASTTAPARETAEPNTNLFVSGLSKRTTSEGLREAFSKFGELVHARVVTDRASGYSKGFGFVKYATIEEAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQPQNNTSLPTYGRY 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00863 141 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 44 122 IPR000504 GO:0003723
Bach13g00863 141 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 46 112 IPR000504 GO:0003723
Bach13g00863 141 MobiDBLite consensus disorder prediction 17 47 - -
Bach13g00863 141 SUPERFAMILY RNA-binding domain, RBD 30 132 IPR035979 GO:0003676
Bach13g00863 141 MobiDBLite consensus disorder prediction 120 141 - -
Bach13g00863 141 Gene3D - 16 133 IPR012677 -
Bach13g00863 141 SMART rrm1_1 45 118 IPR000504 GO:0003723
Bach13g00863 141 FunFam RNA recognition motif-containing protein 23 134 - -
Bach13g00863 141 PANTHER NUCLEOLAR PROTEIN 8 24 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00863 Bach-Chr13 13981417 13983356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00863 43 138 Eukaryotic Initiation Factors Gene Family AT4G34110 30.631 3.38e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00863 - - qsa:O6P43_028978 184.882