Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00856 CCACAAGATCCATCCCCAGGAGACTTTTCTTGGGGTTTAGCAATGAATAACTACCCTGAGTTGTATATGAGGAAGGGGACAGAAAAGTACTTCAGATGTGGTCCATGGAATGGCCTGCGTTTTAGTGGTACACCAGAACTAAATCCCAACTCCATATTTGATTACGAATTCATCTCCAATGAGAATGAGGTGTACTTCACATGGGGCCTCAAAGATGATTCTGTAATCTCAACATTAGTGCTTAATGGGACTGATTATAGTCGTGGTCGCTATTTATGGGATGGAAGTGACAAAAACTGGAGGCTCTATTCATCGTTGCCACAAGATGCCTGTGATTCTTATGGCATCTGTGGAGCCTATGGAAATTGCATCACTACTGAAATACCTATGTGTCAATGTTTAAAAGGATTTACTCCTAAATCACCTCAAAAATGGAACTCCATGGATTGGTCTCAAGGATGTGTACGGAAAAAAGCATTAAGCTGTGAAGACAAGATCAATGATGGATTTGTGAAATTGGTTGGTGTTAAAGTGCCAGATACTACACATACTTGGGTTGATGTGACAACTGGTCTGGAGGAATGCAGAGCCAGGTGCTGGAATAATTGTTCATGCATGGCTTATACAAATTCAGATATCAGAGGAAAAGGCAGTGGCTGTGTCATGTGGTTTGGGGATCTAATTGATATTAGACATTTCGCAGTTAATGGCCAGGATCTATATATTCGAATGCCTGCTTCAGAATTAGACATTTCGCAGTTAATGGCCAGGATCTATATATTCGAATGCCTGCTTCAGAATTAGGGGCTGAAAAGGGGCACAAGAAGAAGTTGGTAGTAATAGTTGCCACCACCATTGTTGCGAGTTTGGGGATGCTTTTACTTGGTTACTACTTTATCCACAAAGCTCGAAGAAAAAGAAAAATGACAGAGAAGCCAAATTCTAGTGATGGAGGACATGTGGATGATTTGGATCTCCCATTGCTTGATCTCTCAATAATTGCTATGGCTACTGATAACTTTTCAATGAAAAACAAGATCGGAGAAGGTGGTTTTGGACCTGTATACAAGGGAATATTAGTAAATGGCCAAGAAATCGCTGTGAAAAGGCTTTCAGCGCTCTCAGGGCAAGGAATTACTGAGTTCAAAAATGAAGTTAAATTGATTGCAAAGCTTCAGCACCGAAGTCTTGTAAAGCTTATTGGATGTTGCATAGAAGGAGAAGAAAAGATGCTGGTTTATGAATACATGCCTAACAATAGCTTGGACTCTTTCATTTTTGATCATACCAAGAGTAAGTTGCTAGATTGGTCTAAGCGCTTCCAGATTATTTGTGGAATTGCACGTGGCGTTATGTATCTTCATCAGGATTCTAGATTGAGAATTATACATAGAGATTTAAAAGCAAGTAATGTTTTACTTGATGATAAGCTGAACCCCAAAGTATCAGATTTTGGCATAGCTAGAAGCTGTGGAGAAGACCGAACAGAAGGAAACACCAAAAGAATAGTGGGAAGTCATGGTTACATGGCGCCAGAATATGTTCTTCATGGATTATTTTCAGTGAAATCTGATGTCTTCAGTTTTGGTATTTTGTTATTGGAGATTATAAGTGGGAAGAAAAGCAGAGTTTTTTTTCATGCAGGCCACACCCTCATTGGTCATGCATGGATGCTATGGAAAGAGGGCAGAGCTACTGAATTAATTGACCCAAACATAGAACATGTTGATGCCAACAGTGTATTGGAAATATTGCGTTGCATCCATATTAGTCTGTTGTGTGTGCAGCATTATCCAGAGGATAGGCCAAGCATGCCATCTGTGGTTCTAATGCTTGGGAGTGAGATTGAATTAGCCAACCCTAGAGAGCCTGGTTTCTTCCCAAATAATATTAGTCTTGACACAACTTCCAGCTCAACTGGAGGAGAATGGGGATCAACAAATGAGATGACCATTACCTTGTTAACTGCACGTTGACAAGTAAAA 1985 0.402 MNNYPELYMRKGTEKYFRCGPWNGLRFSGTPELNPNSIFDYEFISNENEVYFTWGLKDDSVISTLVLNGTDYSRGRYLWDGSDKNWRLYSSLPQDACDSYGICGAYGNCITTEIPMCQCLKGFTPKSPQKWNSMDWSQGCVRKKALSCEDKINDGFVKLVGVKVPDTTHTWVDVTTGLEECRARHFAVNGQDLYIRMPASELGAEKGHKKKLVVIVATTIVASLGMLLLGYYFIHKARRKRKMTEKPNSSDGGHVDDLDLPLLDLSIIAMATDNFSMKNKIGEGGFGPVYKGILVNGQEIAVKRLSALSGQGITEFKNEVKLIAKLQHRSLVKLIGCCIEGEEKMLVYEYMPNNSLDSFIFDHTKSKLLDWSKRFQIICGIARGVMYLHQDSRLRIIHRDLKASNVLLDDKLNPKVSDFGIARSCGEDRTEGNTKRIVGSHGYMAPEYVLHGLFSVKSDVFSFGILLLEIISGKKSRVFFHAGHTLIGHAWMLWKEGRATELIDPNIEHVDANSVLEILRCIHISLLCVQHYPEDRPSMPSVVLMLGSEIELANPREPGFFPNNISLDTTSSSTGGEWGSTNEMTITLLTAR 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00856 592 ProSiteProfiles Protein kinase domain profile. 275 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00856 592 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 93 571 - -
Bach13g00856 592 Gene3D Transferase(Phosphotransferase) domain 1 351 555 - -
Bach13g00856 592 CDD STKc_IRAK 281 546 - -
Bach13g00856 592 ProSiteProfiles EGF-like domain profile. 93 129 IPR000742 -
Bach13g00856 592 SUPERFAMILY Protein kinase-like (PK-like) 261 546 IPR011009 -
Bach13g00856 592 Pfam Protein tyrosine and serine/threonine kinase 276 543 IPR001245 GO:0004672|GO:0006468
Bach13g00856 592 SMART serkin_6 275 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00856 592 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 351 554 - -
Bach13g00856 592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 396 408 IPR008271 GO:0004672|GO:0006468
Bach13g00856 592 Pfam S-locus glycoprotein domain 17 127 IPR000858 GO:0048544
Bach13g00856 592 Gene3D Phosphorylase Kinase; domain 1 236 350 - -
Bach13g00856 592 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 238 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00856 Bach-Chr13 13941559 13944290 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00856 212 560 Receptor kinase-like Gene Family AT4G23230 55.682 3.05e-128 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bach13g00856 PK_Tyr_Ser-Thr 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00856 - - qsu:112015730 722.62