Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00853 CCCTCCCCCACCACTATATAAATACTGAGAAGTAGCGACCCGTTTTTCCATTCATTCATGTTATCAAACAAGTTCCAAACTCAGACTGCAGAGCCCAAACCGGTCCAAGAATCCGATGAACCTTGAACAGAATCAAAGGAAGCATTTTTGTTAATCAGCTTCGTAGCCATGGCAGACGATCAGTTTCAGACGAGTGGGAATTGGTGGGATTCAGCTAGAAACGTCAGGTTCGAAAGTGGGGTATCACAGTCATCTTCCTCTGCTCTCACTAACATGGGCAACTTTGCTTGGCAACAAGCTTCGGATATGGTGGACATTAAGCCAAGGTCTTCCATGGATTCTATGTCAGCCTCGGGGAGTTCCTCTGTGGTTTTCCATGATAACCAGAAACTTCAAGCTCCAGATTCCACTAGTGCCACCGACCCCAACTTGCACATGATGGGTTTAGGCCTTTCTTCCCAACCCATGGATTGGAATCAAGCATCTTTGCTCCGGGGAGGTGACAAGGGTGGGGAGAGCAGTTTCCGTTCGATGCTGCAAGAGAATTTGAGCTCATCAAGCACCGATTTTCAGCAAGAAACTGGGATGGGATTGTCTCATCAAGTTCAATGGAGGGAAAAGCTGTTTTCTCCAGATTCTTCCACGAATGAATTTAAGCAAGCAAACAGGGGTTTCTCTTTGGATCAAACCCAGTTTAGTCCTCAATATAGCTCAGGTGATAGCACAGTAACAAGCCAAGGCTTGCCCTCTACTTTTCCGATGGATTCTTCTGCTCTTTATGGAAGCCCGTCTATATTACAAGGACTATTAGCACCTGAGCATAATCAACAACAACAAGCTTCATTTGATCAGAATCGAACCATGAATTTTCCATACCCAGCAAGCTATGGATTGAACTCAAGTGAGTTAATGCATTCATGGTCTAAAGTTCCTCAGTTTTTAAGAGCTTCACCTCCAAAACACCCATCCCATAATCAATTGCATTTCACAAACAACGCTCCCTTCTGGAATGCTTCAGAGCCAGCCATTAAAGACGTGAGATCTGGCTTCTTCCCATCATTGCAAACTCCATTTCCCACCCCGAATTTCGATGTACAATCAAAGAATATTTCTGAAGGTAGGGAATCAGGCTCGGTGGTAAAGAAAAGTACTAGTGAACTAGCGCCCAAAAGGCCTCGAAGTGAAACCCCATCGCCCTTGCCACCTTTTAAGGTGAGAAAGGAGAAGATGGGAGACAGAATCACTGCTCTCCAACAATTGGTTTCACCTTTCGGAAAGACCGATACTGCCTCAGTGCTCTCTGAAGCCATTGAATACATCAAATTCCTCCATGAACAAGTGACTGTTTTAAGCACCCCATATATGAAAAGTGGAGCTCCAATCCAGCAGAATCAACAGAGTTCTGGTAAATCTAAGGAAACTGAGGCTCCAAAACAAGATCTAAGAAGCCGAGGACTTTGTTTGGTGCCGGTTTCTAGTACATTTCCAGTGACTCACGAAACCACAGTCGATTTTTGGACACCATCGTTCGGAGGAACATTCAGATAATGGTCG 1554 0.4492 MADDQFQTSGNWWDSARNVRFESGVSQSSSSALTNMGNFAWQQASDMVDIKPRSSMDSMSASGSSSVVFHDNQKLQAPDSTSATDPNLHMMGLGLSSQPMDWNQASLLRGGDKGGESSFRSMLQENLSSSSTDFQQETGMGLSHQVQWREKLFSPDSSTNEFKQANRGFSLDQTQFSPQYSSGDSTVTSQGLPSTFPMDSSALYGSPSILQGLLAPEHNQQQQASFDQNRTMNFPYPASYGLNSSELMHSWSKVPQFLRASPPKHPSHNQLHFTNNAPFWNASEPAIKDVRSGFFPSLQTPFPTPNFDVQSKNISEGRESGSVVKKSTSELAPKRPRSETPSPLPPFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPIQQNQQSSGKSKETEAPKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPSFGGTFR 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00853 459 MobiDBLite consensus disorder prediction 168 193 - -
Bach13g00853 459 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 348 404 IPR036638 GO:0046983
Bach13g00853 459 CDD bHLH_AtbHLH_like 344 395 IPR045239 -
Bach13g00853 459 SMART finulus 349 393 IPR011598 GO:0046983
Bach13g00853 459 FunFam Transcription factor bHLH123 family 348 411 - -
Bach13g00853 459 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 131 440 - -
Bach13g00853 459 Gene3D - 348 412 IPR036638 GO:0046983
Bach13g00853 459 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 338 387 IPR011598 GO:0046983
Bach13g00853 459 MobiDBLite consensus disorder prediction 305 327 - -
Bach13g00853 459 MobiDBLite consensus disorder prediction 403 425 - -
Bach13g00853 459 MobiDBLite consensus disorder prediction 305 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00853 Bach-Chr13 13901996 13904353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00853 109 459 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 48.718 2.10e-77 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00853 - - gmx:100778697 683.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g00853 13 13901996 13904353 Bach13g00853 13 13901996 13904353 ECH