Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00848 ATGAAGCTTGGAAAAGACTTGAGAACTGGTCTTAACCGGAGACTCATTTCGTGGAAGAATGAAAATGATCCATCTCCAGGAAACTTAATATGGGGTATGGATGTCACCAATTACCCTGAACCAATGATGTGGATAGGCTCAAAGAAGTATTTCAACAGTGGTCCATGGAATGGACTTCAATACAGTGGCAAACCAACCACAAAACGACACCCAGTTTATGATTTCATATACCATTCTGATGAGAATGAAGTATATTACATGTTTCTCCTCTTCAACCAGTCCGTGAAAGCAAGAATGATAGTGAATCAAACAACACTTCTTCGTTACCATTCAGTATGGGTAGAGGCAGAGAAAATATGGAGGATGTATGCTTCATTGCCAAGAGATTTCTGTGATAAATATGGAGCTTGTGGTCCTAATGGGAATTGTGATGAGAACAAGTCACCAAATTGTGATTGTTTGAGAGGGTTTAAGCCCAAATCACCAAGCAATTGGAATATAATGGACTTCACTGAAGGGTGTGTACGTGATGAACCATTGGACTGCAAGAGTGATGGGTTTGTCAAATATATAGGGATGAAAGTGCCTGATACTGAACATAGTTGGTTGAACCAAAGCATGTCTTTGTTGGAGTGCAGAGAAAAATGCTTGAGCAACTGTTCTTGTAACTCTTATACAAATTCTGATATCAGAGGATCAGGCAGTGGCTGTGCCTTGTGGTTTGGTGATTTAAATGACTTGCGGGTTCAACCTGATGCAGGGCAGGATCTGTATGTTCGAGTTCCAGCTTCAGAATTAGAGTCAAATAATGGACGCAAGATCAAGATTGGAGTTACTGTGGGAAGTACCATTGGAGCAATAGTTGTGTTGCTCTTGGTTCTCTATTTTGTATGCAGAAGGAGAAGAAGGGTCACCTCAAAAAAAAGCGTGGTGACGAGGGAGAAATTCATAGAAGAGAAGGAAGATCTGGAGCTTCCATTGTTTGATCTAGCAAGAATAGTTAGTGCTACAGATAACTTCTCAATCAGCAATAAGCTTGGAGAAGGTGGTTTTGGACCCGTATACAAGGGGACACTAGATGGTGGACAAGAAATTGCTGTCAAAAGACTTTCAAGAACTTCTGGACAAGGGCTAAAGGAATTCAAAAACGAAAATGCAATGGGTCATAACACAGTGCTACCTGATTTTCAAAGATTCCTGCCATCAAGTCCATCTAGATTTCAGATGGCTAATTTGACTATTCGAAGTGAACCCAGCACAATAGTCAAACCATCCTTCGTTAACAATAAGGATGAGGTATACTTCACCTGGACCCTCAGGGATCATTCTGCAATTTTAATACCAGGACTTAACCAAACCACTTATAAACGCAATCGCTATATATGGGATGAAGTAGCTAAAATCTGGAGGCTTTATTCAGTAGTGCCACAAGACTTCTGTGATAGTTATGGTCTATGTGGACCTTTTGGAAATTGTATCAATACTGAGACGCCTGTGTGCCAATGTCTAAAAGGGTTCACTCCAAAGTCACCTGAAGCGTGGAACGCACGGGACTGGACTCAAGGATGTGTCAGGAATACAAACTTAAGCTGCGAGGATAAACACAAGGTTGGATTTGTCAAATTGATTGGGATGAAAGTGCCTGATACTACAAATACTTCGGTAGATGAGACAATTGGTCTTGAAGAATGCAGCGCCAAGTGTTTGAATAATTGTTCTTGCGTGGCTTATACAAACTCAGATATAAGGGGAGAAGGTAGTGGCTGTGTCATGTGGTTTGGTGATCTAATTGATATTAGACAGTATTCAGCTGATGGTCAGGATCTTCATATTCGAATGCCTGCTTCAGAATTGGGGGCAGAACAAGGCTGGCACAAGAAGTTAATAGTAATAGTTGTTACCTCTATTGTTCCAGTTGCTGGGGTGATTTTGCTAGTTTACTATTACACCAACAAAGCCCGCAGGAAAACGACAGCCCCCTTTTCTTCCTCCATTTTGTCAGAGGAGTCTGAAGTTACTGATGGACGACACGCAGATGATTTGGATCTCCCGATATTAAGAATTATTCATAGAGATTTAAAAGCAAGTAATGTTCTACTTGATAATGAGATGAACCCGAAAATATCAGACTTTGGCATAGCTAGAAGTTGTGAAGGAGACCAAATAGAAGGAAGCACAAATAGAATAATTGGAACTTATGGCTATATGGCACCGGAATATGTTGTTCATGGGTTATTTTCAGTGAAGTCTGATGTCTTTAGCTTTGGTATTTTGTTACTTGAAATCATATGTGGGAAGAAAAGTAAGGAGTTTTATCGTGCAGGCCACACCCTTATTGGTAATATCACCCAACATGTGGGACATGGCTGGGTCAATGTTAGTGACTACTCATTTGACATGCGTGGGGACTGGAAAGAAGGCAGGCCATTAGAACTAATTCATACAAACCTAGAAGACTCATGCTCTCTATCACAAATATTGCATTGCTTTCATGTTAGTCTCTTGTGTGCTCAACAGCAGCCAGAGGATAGACCCAGAATGGACTTGCCTGAGCCCAAACATCCAGGTTCCTTTGGGAAAGATTCTGGTGAAGCATATTATTGA 2604 0.4094 MKLGKDLRTGLNRRLISWKNENDPSPGNLIWGMDVTNYPEPMMWIGSKKYFNSGPWNGLQYSGKPTTKRHPVYDFIYHSDENEVYYMFLLFNQSVKARMIVNQTTLLRYHSVWVEAEKIWRMYASLPRDFCDKYGACGPNGNCDENKSPNCDCLRGFKPKSPSNWNIMDFTEGCVRDEPLDCKSDGFVKYIGMKVPDTEHSWLNQSMSLLECREKCLSNCSCNSYTNSDIRGSGSGCALWFGDLNDLRVQPDAGQDLYVRVPASELESNNGRKIKIGVTVGSTIGAIVVLLLVLYFVCRRRRRVTSKKSVVTREKFIEEKEDLELPLFDLARIVSATDNFSISNKLGEGGFGPVYKGTLDGGQEIAVKRLSRTSGQGLKEFKNENAMGHNTVLPDFQRFLPSSPSRFQMANLTIRSEPSTIVKPSFVNNKDEVYFTWTLRDHSAILIPGLNQTTYKRNRYIWDEVAKIWRLYSVVPQDFCDSYGLCGPFGNCINTETPVCQCLKGFTPKSPEAWNARDWTQGCVRNTNLSCEDKHKVGFVKLIGMKVPDTTNTSVDETIGLEECSAKCLNNCSCVAYTNSDIRGEGSGCVMWFGDLIDIRQYSADGQDLHIRMPASELGAEQGWHKKLIVIVVTSIVPVAGVILLVYYYTNKARRKTTAPFSSSILSEESEVTDGRHADDLDLPILRIIHRDLKASNVLLDNEMNPKISDFGIARSCEGDQIEGSTNRIIGTYGYMAPEYVVHGLFSVKSDVFSFGILLLEIICGKKSKEFYRAGHTLIGNITQHVGHGWVNVSDYSFDMRGDWKEGRPLELIHTNLEDSCSLSQILHCFHVSLLCAQQQPEDRPRMDLPEPKHPGSFGKDSGEAYY 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00848 867 ProSiteProfiles Protein kinase domain profile. 340 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00848 867 Pfam PAN-like domain 182 247 IPR003609 -
Bach13g00848 867 Pfam PAN-like domain 531 599 IPR003609 -
Bach13g00848 867 CDD PAN_AP_plant 527 614 - -
Bach13g00848 867 CDD EGF_CA 478 510 - -
Bach13g00848 867 SUPERFAMILY Protein kinase-like (PK-like) 687 848 IPR011009 -
Bach13g00848 867 SMART ntp_6 182 261 IPR003609 -
Bach13g00848 867 SMART ntp_6 534 613 IPR003609 -
Bach13g00848 867 MobiDBLite consensus disorder prediction 844 858 - -
Bach13g00848 867 ProSiteProfiles EGF-like domain profile. 476 512 IPR000742 -
Bach13g00848 867 MobiDBLite consensus disorder prediction 843 867 - -
Bach13g00848 867 ProSiteProfiles PAN/Apple domain profile. 531 615 IPR003609 -
Bach13g00848 867 Gene3D Transferase(Phosphotransferase) domain 1 682 850 - -
Bach13g00848 867 ProSitePatterns Serine/Threonine protein kinases active-site signature. 688 700 IPR008271 GO:0004672|GO:0006468
Bach13g00848 867 Pfam Protein kinase domain 687 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00848 867 SUPERFAMILY Protein kinase-like (PK-like) 324 387 IPR011009 -
Bach13g00848 867 Gene3D Phosphorylase Kinase; domain 1 299 391 - -
Bach13g00848 867 SMART serkin_6 340 830 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00848 867 PIRSF SRK 1 387 IPR024171 GO:0004674
Bach13g00848 867 PIRSF SRK 683 849 IPR024171 GO:0004674
Bach13g00848 867 PIRSF SRK 401 686 IPR024171 GO:0004674
Bach13g00848 867 Pfam S-locus glycoprotein domain 419 510 IPR000858 GO:0048544
Bach13g00848 867 Pfam S-locus glycoprotein domain 51 161 IPR000858 GO:0048544
Bach13g00848 867 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 1 386 - -
Bach13g00848 867 CDD PAN_AP_plant 179 262 - -
Bach13g00848 867 ProSiteProfiles PAN/Apple domain profile. 182 262 IPR003609 -
Bach13g00848 867 ProSiteProfiles EGF-like domain profile. 127 163 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00848 Bach-Chr13 13864766 13872481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00848 686 861 Receptor kinase-like Gene Family AT4G11480 47.340 3.57e-47 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bach13g00848 Pkinase 5.3e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00848 - - lja:Lj1g3v2033030.1 570.081