Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00840 ATGTTGAAATCTCCTTCTTCTGAAAAGAATAATGGGTTGAAGAAAGGTCCATGGACTCCAGACGAAGATCAGAAACTCATTGATTATATTCAGAAGCATGGACACGGCAAATGGGGAACTCTTCCCAAGAATGCAGGACTCAAACGATGTGGAAAGAGTTGCCGGCTTCGCTGGACAAATTACTTGAGGCCAGATATAAAAAGAGGGCGATTCTCATTTGAAGAAGAAGAAGCCATCATCCAGTTACACAGTGTTTTGGGAAACAAGTGGTCTACAATTGCGGCTAACTTACCAGGAAGAACAGATAACGAGATCAAGAACCATTGGAATACTCATATCAAAAAGAGGCTATTGAAGATGGGAATTGATCCAGTGACTCACACTCCATGCCTTGATCTTCTACAACTCTCCTCAATTGTGAATTCGTCTTTGTACAGTTCACCCCAGCTCAATTATCCTGATCTGCTTGGGATGGCTAGTCTGCTAAATCCCAGCTTTCTAAGTTTGCTCACAACTTTGTTATCATCTCAAAGCAGAAACCCAGATATTACAAATATAAATCAACTTTTGCAGCAAAACCAACTTCCCCTAGTGCAGAACCAACCCCCGTGTTCCCAACCGATGCAGCTTAACTCAGTTCAAACAGCTTTCCAACCAAACCAGCTCCAAGTCCCTATTCAAGATTCCCATATTGAATCCCAACCCTTGAAAGCAAAACTAGATCAAGTTTCTCCAAGTGCCACTGACTTTAGCTACCTAAGTACTCTACCAGATCAATCCCAAACACAAAACTTTTCTTTACCAAAATTCAATTCCATGATCGACAGTCTCATGGAAAATCAAGTGTCACAGCTATCAAATTTCAATTTAAGCACACTGTTGTCTTCGACTACCTCATCTTCAAGCCCTAGTGCTTTGAATTCATCATCTTCCACCAAATTTGTCAATGGAAATACTGAAGATGAAAGAGACACTTACTGCAGCAATATGTTGATGTACAATATCTCAAGTGGTTTAAATGAAAGCGGACTTTTTTGA 1038 0.4046 MLKSPSSEKNNGLKKGPWTPDEDQKLIDYIQKHGHGKWGTLPKNAGLKRCGKSCRLRWTNYLRPDIKRGRFSFEEEEAIIQLHSVLGNKWSTIAANLPGRTDNEIKNHWNTHIKKRLLKMGIDPVTHTPCLDLLQLSSIVNSSLYSSPQLNYPDLLGMASLLNPSFLSLLTTLLSSQSRNPDITNINQLLQQNQLPLVQNQPPCSQPMQLNSVQTAFQPNQLQVPIQDSHIESQPLKAKLDQVSPSATDFSYLSTLPDQSQTQNFSLPKFNSMIDSLMENQVSQLSNFNLSTLLSSTTSSSSPSALNSSSSTKFVNGNTEDERDTYCSNMLMYNISSGLNESGLF 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00840 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Bach13g00840 345 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bach13g00840 345 MobiDBLite consensus disorder prediction 1 20 - -
Bach13g00840 345 Gene3D - 70 117 - -
Bach13g00840 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Bach13g00840 345 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 295 - -
Bach13g00840 345 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Bach13g00840 345 SMART sant 67 115 IPR001005 -
Bach13g00840 345 SMART sant 14 64 IPR001005 -
Bach13g00840 345 MobiDBLite consensus disorder prediction 299 319 - -
Bach13g00840 345 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Bach13g00840 345 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Bach13g00840 345 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Bach13g00840 345 FunFam MYB-related transcription factor 14 67 - -
Bach13g00840 345 CDD SANT 70 113 IPR001005 -
Bach13g00840 345 FunFam MYB transcription factor 69 130 - -
Bach13g00840 345 Gene3D - 12 68 - -
Bach13g00840 345 CDD SANT 17 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00840 Bach-Chr13 13806886 13808249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00840 1 344 MYB Transcription Factor Family AT4G21440 47.527 1.59e-91 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach13g00840 Myb_DNA-binding 2.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00840 K09422 - gmx:100820398 407.527