Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00834 ATGGCCACCATAGAGCAGGATAACTCACGTGCTTCACGCATGCACTACTACACCACAGATAGTGACGAGGAATCAGACCACGTCAACACCGACGAAGACGAGGATAACCAAGAAGAAGAAGAAGGAAATGAAAAAGCTGACAACAAGGCTGTTGGATGCTGGCCAGCCACACGCCTCAGCGGTTTCTGCGGTCCACGGCGGTTCTGTTCTGGCTTTTCGATGGGGAGGGTGTTGGACCCGAGAGCGAAATGGGTTGAAGAATGGAACAGGGTGTTCCTGCTCGTATGCGCTGCGGGGTTGTTTGTGGACCCACTCTTCTTGTACGCGCTCTCTATAAGCGACACGTGTATGTGCCTGTTCGTGGATGGGTGGTTCGCCATCACGGTGACGGTACTCCGGTGCATGACGGATGCGTTGCACGTGTGGAACATGTGGTTGCAGCTCAAAATGGCCAGACGCTCGTTTGGCGTGGGTGGCGGACACAATGGGCTTAGAGACACTAGCCCTGGCTCAGTTGCTCTGCACTATCTCAAGGCTAAGAGAGGCTTCTTCTTTGACGTCTTTGTTATTCTTCCTCTGCCCCAGATTGTAGTATGGGTCACAATTCCCTATCTGTTGGAGAAAGGTTCAGTTACATTGGTGATGACAGTGTTCTTAATTATGTTCTTGTTCCAATATCTTCCCAAGATCTATCACTCTGTTTGCCTCCTCCGTCGCATGCAGAACCTCTCTGGCTACATTTTTGGGACAGTTTGGTGGGGTATCGCCCTTAACATGATCGTATATTTTGTTGCATCCCATGCAGCAGGGGCGTGTTGGTATTTGTTAGGGATTCAAAGGGCAACCGAGTGCCTGAAGGAGCAGTGTGGGAAAACAAGTAGTTGTGACTTGAGAATGCTGTCATGCAAAGAACCTATTTATTATGGAACAAGCAGCATGGTGAGGAACACAGCAAGATTGGCCTGGGCAGAGAACAAGCAAGCCAGGTCTACGTGCTTGGATAGCTCAGATAATTATGATTATGGAGCTTATAAGTGGACTGTTCAACTTATCACAAATGATAGTCGCTTGGAAAAGATCCTTTTCCCTATCTTCTGGGGCCTAATGACTCTCAGCACCTTCGGGAACCTTGAGAGCACAACAGAATGGCTAGAAGTTGTATTCAATATTATCGTCTTGACCAGTGGGCTCCTTCTAGTTACCATGCTGATTGGTAATATCAAGGTGTTTTTGCATGCAACAACATCAAAGAAGCAAGCAATGCAATTGAAGATGAGGAACATTGAATGGTGGATGAGGAAAAGGGAATTGCCTCAAGGTTTCCGGCAGCGGGTGAGAAACTACGAACGGCAGCGGTGGGCCGCCATGCGCGGTGTCGATGAATGTGATATGATCAGAAATCTCCCCGAGGGACTTAGAAGGGACATCAAGTACCATCTCTGTTTGGATTTGGTCAGACAGGTGCCACTATTTCAACATATGGACGATCTGGTCCTAGAGAACATCTGCGATCGTGTGAAGTCACTTATATTCACAAAGGGAGAAACAATAACGAGAGAGGGAGACCCAGTTCAAAGAATGGTCTTTGTAGTAAGAGGTCACCTTCAGAGTAGCCAAGTGCTGCGAGATGGAGTGAAAAGTTGCTGCATGTTAGGCCCTGGAAACTTCAGTGGAGATGAGCTGCTTTCATGGTGTTTGAGGAGACCCTTTATAGAGCGGCTTCCACCATCTTCATCAACCTTGGTGACGCTTGAAACCACAGAGGCATTTGGGCTTGAAGCAGAGGACGTCAAGTACGTGACTCAACACTTTAGATACACGTTTGTGAATGAAAAGGTTAAGAGAAGCGCCAGGTATTACTCACCAGGGTGGAGAACATGGGCTGCTGTGGCCATTCAATTGGCTTGGAGAAGGTATAAGCACAGGTTGACCTTGACGTCTCTGTCCTTTATAAGGCCAAGGAGGCCTCTGTCAAGGTGCTCTTCCATGGGAGAGGATAAGCTTCGTCTCTATACAGCTTTGTTAACTTCACCAAAGCCTAATCAAGATGATTTTGACTTTTGA 2064 0.4787 MATIEQDNSRASRMHYYTTDSDEESDHVNTDEDEDNQEEEEGNEKADNKAVGCWPATRLSGFCGPRRFCSGFSMGRVLDPRAKWVEEWNRVFLLVCAAGLFVDPLFLYALSISDTCMCLFVDGWFAITVTVLRCMTDALHVWNMWLQLKMARRSFGVGGGHNGLRDTSPGSVALHYLKAKRGFFFDVFVILPLPQIVVWVTIPYLLEKGSVTLVMTVFLIMFLFQYLPKIYHSVCLLRRMQNLSGYIFGTVWWGIALNMIVYFVASHAAGACWYLLGIQRATECLKEQCGKTSSCDLRMLSCKEPIYYGTSSMVRNTARLAWAENKQARSTCLDSSDNYDYGAYKWTVQLITNDSRLEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRELPQGFRQRVRNYERQRWAAMRGVDECDMIRNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMVFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLVTLETTEAFGLEAEDVKYVTQHFRYTFVNEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLSFIRPRRPLSRCSSMGEDKLRLYTALLTSPKPNQDDFDF 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00834 687 Pfam Cyclic nucleotide-binding domain 511 598 IPR000595 -
Bach13g00834 687 MobiDBLite consensus disorder prediction 1 15 - -
Bach13g00834 687 MobiDBLite consensus disorder prediction 25 41 - -
Bach13g00834 687 MobiDBLite consensus disorder prediction 1 49 - -
Bach13g00834 687 SUPERFAMILY Voltage-gated potassium channels 84 411 - -
Bach13g00834 687 CDD CAP_ED 490 596 IPR000595 -
Bach13g00834 687 FunFam cyclic nucleotide-gated ion channel 4 488 606 - -
Bach13g00834 687 Gene3D Jelly Rolls 488 606 IPR014710 -
Bach13g00834 687 ProSiteProfiles cAMP/cGMP binding motif profile. 490 600 IPR000595 -
Bach13g00834 687 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 45 652 - -
Bach13g00834 687 Gene3D Helix hairpin bin 415 481 - -
Bach13g00834 687 FunFam Cyclic nucleotide-gated ion channel 1 417 481 - -
Bach13g00834 687 SUPERFAMILY cAMP-binding domain-like 416 604 IPR018490 -
Bach13g00834 687 Pfam Ion transport protein 88 407 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00834 Bach-Chr13 13741584 13748502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00834 58 686 Ion Channels AT5G54250 80.343 0.0 1052
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00834 K05391 - cave:132174634 1170.22