Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00826 ATGGCCACCAGGAACGAGAAAGCTAACGTTTCTAAAGAGCTCAACGCCAGGCACAAAAAGATACTGGAAGGACTTCTTAAATTGCCAGAGAATAGGGAATGTGCTGACTGCAAAGCTAAGGGGCCAAGATGGGCTAGTGTGAACCTAGGCATCTTTATATGCATGCAGTGTTCAGGAATACACCGAAGTCTTGGGGTTCATATATCAAAGGTTCGGTCTGCCACACTGGACACATGGCTTCCAGAGCAGGTTGCCTTCATTCAATCAATGGGAAATGAGAAAGCTAACAGTTATTGGGAGGCAGAGTTACCACCAAATTACGACAGAGTTGGAATTGAGAATTTCATTCGTGCAAAGTATGAAGAGAAGAGATGGGTTCCAAGGGATGGAAAACCAAAATCGCCTTCTAGATTGCCGGAAGAAAAGGCTTCTTCACATTGGCAAAGGCCAGCAGAAAGAAGTGGGTATGGATATGCATCTGTTTCTGAGAATACATTTGAGGAAAGGAAGAAAGTTCAACCATCAACTACAATTCCTGCTACAAGAATTAGTGTTCCTGCTACGAGAATTAGTGTCCCTGCTCCTCCCAAAGGACCTGACCAGGTAACTCCTACTAAACCGCAGCATGTTGAGAAAGTTGAACAAGTGGCGCCACAACCGCAAGTGGAAACAACAAAGACACCAACTGAAACAGTTCAGAATATCCCCCCTAAAGTTGATTATGCTACGGACCTTTTCAACATGTTGTCCATGGATGGCCCAAGTGAAAATGGCTCCGAGACAACTAGCACTGATGATAATAACTGGGCAGGTTTCCAGTCTGCCACAGAACCATCAACAGCTGAGAAGACTGGTTCAACAAAAGCAGTTGAAAGTACTCCCCAGCCTGCTTCTGGGATTGAGGATTTATTCAAAGATTCACCTTCAGTGACTCCAAGCTTAGTTCCGGAAAAACCACAAAAAGATTTAAAAAATGATATCATGAGCCTCTTTGAGAAGTCAAGCATGGTGTCTCCATTTGCTATGCATCAACAACAGCTTGCCATGCTGGCGCAGCAACAATCCCTCCTGATGGTGGCTGCTGCTAAATCTGGGGACCCCAAGTCCATCTTGGCACAGCAACAGTCCCTTCTAATGGCTGCTGCATCTAAATCTGCTGGTGGGGACCCCAAATTTCCTATTAGTACACAACAGCCCGGACTGAATGGATCCATTCCTGTCCAAAGTTGGCCAACTGTTGGCTACCCTACTCCTGGAGTTATGCCCATGGGTGGTCAGGGAGATTTGCAGAAACTCATGCAGGCTACGAACACAGGCCTAGCAAATCATATGGGAAGCTCTGTTCAGTATCCATCATCTGGTTTCTATACAATGGGACAAGTTGCTCCAGTTAATGGTATGATGACGGCTGGGGTGAGTAAACCACAGTCAGCAGCTCCAGTGTCATCAACCTCTTCACAGACAGGGTCAGGGAAGGATTATGATTTTTCCTCTTTAACACAAGGGATGTTTGCGAAACAATGA 1524 0.4573 MATRNEKANVSKELNARHKKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPNYDRVGIENFIRAKYEEKRWVPRDGKPKSPSRLPEEKASSHWQRPAERSGYGYASVSENTFEERKKVQPSTTIPATRISVPATRISVPAPPKGPDQVTPTKPQHVEKVEQVAPQPQVETTKTPTETVQNIPPKVDYATDLFNMLSMDGPSENGSETTSTDDNNWAGFQSATEPSTAEKTGSTKAVESTPQPASGIEDLFKDSPSVTPSLVPEKPQKDLKNDIMSLFEKSSMVSPFAMHQQQLAMLAQQQSLLMVAAAKSGDPKSILAQQQSLLMAAASKSAGGDPKFPISTQQPGLNGSIPVQSWPTVGYPTPGVMPMGGQGDLQKLMQATNTGLANHMGSSVQYPSSGFYTMGQVAPVNGMMTAGVSKPQSAAPVSSTSSQTGSGKDYDFSSLTQGMFAKQ 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00826 507 PRINTS HIV Rev interacting protein signature 50 67 IPR001164 GO:0005096
Bach13g00826 507 PRINTS HIV Rev interacting protein signature 71 92 IPR001164 GO:0005096
Bach13g00826 507 PRINTS HIV Rev interacting protein signature 31 50 IPR001164 GO:0005096
Bach13g00826 507 MobiDBLite consensus disorder prediction 218 234 - -
Bach13g00826 507 MobiDBLite consensus disorder prediction 249 319 - -
Bach13g00826 507 Pfam Putative GTPase activating protein for Arf 20 126 IPR001164 GO:0005096
Bach13g00826 507 MobiDBLite consensus disorder prediction 472 499 - -
Bach13g00826 507 MobiDBLite consensus disorder prediction 126 148 - -
Bach13g00826 507 ProSiteProfiles ARF GTPase-activating proteins domain profile. 19 133 IPR001164 GO:0005096
Bach13g00826 507 Gene3D Arf GTPase activating protein 2 132 IPR038508 -
Bach13g00826 507 MobiDBLite consensus disorder prediction 250 294 - -
Bach13g00826 507 SMART arf_gap_3 19 133 IPR001164 GO:0005096
Bach13g00826 507 CDD ArfGap 22 120 - -
Bach13g00826 507 FunFam stromal membrane-associated protein 1 isoform X1 4 131 - -
Bach13g00826 507 SUPERFAMILY ArfGap/RecO-like zinc finger 18 127 IPR037278 -
Bach13g00826 507 MobiDBLite consensus disorder prediction 126 154 - -
Bach13g00826 507 MobiDBLite consensus disorder prediction 212 234 - -
Bach13g00826 507 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 5 366 IPR044520 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00826 Bach-Chr13 13678807 13683424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00826 19 126 C2H2 Transcription Factor Family AT4G05330 49.138 3.60e-30 119