Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00807 ATGAGCAAAAAGGGGGACGAAGAAGACGAAGAGGAGTGCTTCTACGAGTCCCACGACCGCCTTGTATCGTCGTCTTGTTCCTGTTCCACTTCCAACTCCGACGACGAGAACGACTCCAATCCCAACTCTCCTTCTCCGAATTATGGTTCGGACCAACCGTTCCTGGTGCCCAAATTCCCAGCTGCCATGTGCAGGTACGATATATGGATCTCCGAACCCTCCTCCGTGTCCGAACGCCGGACCCGGCTCCTTCACCTGATGGGTCTTAGCGGTGACCCATCATTGTCCCGAGGGAAGACTGCTTCCGCCGGTGATCTTCAAGAAGTGGACAATGGAGAGTTTGGCCGATTGGTGTCGTCTGATCACTTGACAAGGCATCAACCGGGTGAGAGTTCCGGTGGTCTCGCTGCCATACTTCGATTGAAATCCGACGGGGCGGCGGATCAATGCCACGTTTCATTGTGTGGTCAGTCTCATGATCGCTGTAATAAGTCTTCTTCCTGTTTTTGCTCGTCTTCTTCAATTCTTTCTATTCATTCGAGCGGCTCATTTGTAAATAACCGTAATCATATTATTAAGTCAAAGTACAGTAATGGCAATGGATCCCCAGTTGCTACTGCCGCTTCCCCCAATAAGCCGCCTTCGGGGAAAAATTATAGAAGGGTGGGTGAAATTCGAAGTGTGAGCATGGATTTCGGTCATAGTTCGGTGGTGCCAGTTTCCGATAATGCAGGTCCTGGAGAGGTGGAGGACGGTCTCGACTGTAATGGGGTTGACAAGGTCAATGAACAAGTCTGCACAATAAGAGATCTTGACAATGGAAAAGAGTTTGTTGTGAATGAGATTAGGGAAGATGGCATGTGGAACAAACTCAAGGAAGTGGGTACTGGAAGGCAGTTGACTATGGAGGAATTTGAGATGACAGTTGGCCACTCACCAATCGTTCAAGAATTAATGCGACGGCAAAATGTGGAGGAGGGTAATAAAGACAATGGTGATTCAAATGCAAGTGGTGGTAGTGGAGGTAGTTCCAAGCTCAAGAAGAAAGGGAGTTGGTTGAAGAGTATAAGGAGTGTAGCAAGCACTATTGCAGGTCATAAAGAGAGACGTAGTGGTGATGAAAGGGATACCTCATCAGAGAAGGGTGGTCGGAGGTCAAGCTCTGCCACAGATGATAGCCAGGATGCCTCTTTTCATGGGCCTGAGAGAGTAAGGGTTAAGCAATATGGGAAATCTAGCAAAGAGGTTACAGCACTCTTTAAAACCCAAGAGATACAGGCTCATAATGGATCTATATGGAGCATTAGGTTTAGTCTGGATGGAAAATATCTTGCTAGTGCTGGCGAGGATTGTGTAATTCATGTTTGGCAAGTTGTGGAGTCAGAGAGGAAGGGAGAGCTGCTAATGGAGAGACCAGAAGATGGGAATTTGAATATGCTGTTTGTTATGAATGGATCACCAGAACCAACTCTTCTGTCCCCAATAATGGACAACCATCCTGAGAAGAAGAGAAGGGGGAGGTCATCTATAAGTAGAAAATCTTTGAGCTTGGACCAATTGATGGTGCCAGAAACTGTGTTTGGACTTGCAGAAAGACCCATTTGCTCATTCCAAGGCCATCTGGATGATGTGCTTGACCTGTCTTGGTCCAAGTCTCAGCACTTGCTATCATCCTCAATGGACAAAACAGTGCGGCTATGGCACTTGTCTAGCAAGTCTTGTTTGAAGGTCTTTTCTCACAGTGACTTTGTAACTTGCATCCAATTTAATCCTGTTGATGATAGATACTTCATTAGCGGATCCTTGGATGCTAAGGTTCGCATATGGAGCATTCCTGATCGTCAAGTTGTTGATTGGACTGATTTGCATGAGATGGTGACTGCTGCTTGCTACACACCTGATGGTCAGGGAGCACTAGTGGGTTCATACAAGGGTAGCTGCCATTTATATGATACATCTGAGAATAAGTTGCAACAGAAAAGTCAGATGAACCTGCAGAACAAGAAAAAGAAGTCCCATCACAAGAAAATTACTGGCTTCCAGTTTGCCCCAGGAAGTTCATCAGAAGTACTCATCACTTCTGCTGATTCACGTATTCGGGTTGTTGATGGTGTTGATCTAGTTCATAAGTTCAAAGGGTTTCATAACGCAAACAGCCCAATTTCAGCCTCCCTCACAGCAAATGGTAAATATATTGTCTCAGCAAGCGAGGATTCCCATGTATACATATGGAAAAACGAGGCCGATTGCAGGCCAAACAGAAGCAAAGGTGTCACTGTTACACATTCATATGAACATTTTCACTGTAAAGATGTTTCAGTGGCCATTCCTTGGCCTGGCAAGGGGGATACATGGGGGATGCACGATACTTTATCTGCAGAACAAACTGGAGATGATAATAACCTGGATGAGGTCTCATCAGCCAATCATCCTCCTACCCCGGTGGAGGAAAATTTTGGTACATACGGTTCTCCATGTGCATCTGGCTGCAACAACAGTCCACTTCATGCAACCATTGCTAGCACCACAAACAGTTACTTTTTCGATCGGATTTCGGCGACATGGCCAGAGGAAAAGCTTGTTGTAGCCGCAAGGAATCGAAGTCCTCAAGTGAGCATGGATATCTCTTCCGGGTTAAGTCAAAACATGTCAGCCTGGGGTATGGTCATTGTAACTGCCGGCTTGAGGGGGGAAATTAGAACTTTCCAAAATTTAGGATTACCACTTCGGATATAG 2736 0.4609 MSKKGDEEDEEECFYESHDRLVSSSCSCSTSNSDDENDSNPNSPSPNYGSDQPFLVPKFPAAMCRYDIWISEPSSVSERRTRLLHLMGLSGDPSLSRGKTASAGDLQEVDNGEFGRLVSSDHLTRHQPGESSGGLAAILRLKSDGAADQCHVSLCGQSHDRCNKSSSCFCSSSSILSIHSSGSFVNNRNHIIKSKYSNGNGSPVATAASPNKPPSGKNYRRVGEIRSVSMDFGHSSVVPVSDNAGPGEVEDGLDCNGVDKVNEQVCTIRDLDNGKEFVVNEIREDGMWNKLKEVGTGRQLTMEEFEMTVGHSPIVQELMRRQNVEEGNKDNGDSNASGGSGGSSKLKKKGSWLKSIRSVASTIAGHKERRSGDERDTSSEKGGRRSSSATDDSQDASFHGPERVRVKQYGKSSKEVTALFKTQEIQAHNGSIWSIRFSLDGKYLASAGEDCVIHVWQVVESERKGELLMERPEDGNLNMLFVMNGSPEPTLLSPIMDNHPEKKRRGRSSISRKSLSLDQLMVPETVFGLAERPICSFQGHLDDVLDLSWSKSQHLLSSSMDKTVRLWHLSSKSCLKVFSHSDFVTCIQFNPVDDRYFISGSLDAKVRIWSIPDRQVVDWTDLHEMVTAACYTPDGQGALVGSYKGSCHLYDTSENKLQQKSQMNLQNKKKKSHHKKITGFQFAPGSSSEVLITSADSRIRVVDGVDLVHKFKGFHNANSPISASLTANGKYIVSASEDSHVYIWKNEADCRPNRSKGVTVTHSYEHFHCKDVSVAIPWPGKGDTWGMHDTLSAEQTGDDNNLDEVSSANHPPTPVEENFGTYGSPCASGCNNSPLHATIASTTNSYFFDRISATWPEEKLVVAARNRSPQVSMDISSGLSQNMSAWGMVIVTAGLRGEIRTFQNLGLPLRI 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00807 911 MobiDBLite consensus disorder prediction 325 409 - -
Bach13g00807 911 MobiDBLite consensus disorder prediction 1 52 - -
Bach13g00807 911 MobiDBLite consensus disorder prediction 195 219 - -
Bach13g00807 911 MobiDBLite consensus disorder prediction 329 344 - -
Bach13g00807 911 PRINTS G protein beta WD-40 repeat signature 555 569 IPR020472 -
Bach13g00807 911 PRINTS G protein beta WD-40 repeat signature 444 458 IPR020472 -
Bach13g00807 911 PRINTS G protein beta WD-40 repeat signature 597 611 IPR020472 -
Bach13g00807 911 MobiDBLite consensus disorder prediction 20 50 - -
Bach13g00807 911 ProSiteProfiles Trp-Asp (WD) repeats profile. 537 577 IPR001680 GO:0005515
Bach13g00807 911 ProSiteProfiles Trp-Asp (WD) repeats profile. 577 611 IPR001680 GO:0005515
Bach13g00807 911 Gene3D - 388 488 IPR015943 GO:0005515
Bach13g00807 911 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 577 611 - -
Bach13g00807 911 Gene3D - 517 774 IPR015943 GO:0005515
Bach13g00807 911 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 425 458 - -
Bach13g00807 911 SMART WD40_4 418 457 IPR001680 GO:0005515
Bach13g00807 911 SMART WD40_4 530 568 IPR001680 GO:0005515
Bach13g00807 911 SMART WD40_4 571 610 IPR001680 GO:0005515
Bach13g00807 911 SMART WD40_4 613 651 IPR001680 GO:0005515
Bach13g00807 911 SMART WD40_4 704 745 IPR001680 GO:0005515
Bach13g00807 911 SMART WD40_4 658 703 IPR001680 GO:0005515
Bach13g00807 911 MobiDBLite consensus disorder prediction 363 388 - -
Bach13g00807 911 FunFam Transducin/WD40 repeat-like superfamily protein 383 486 - -
Bach13g00807 911 Pfam WD domain, G-beta repeat 423 456 IPR001680 GO:0005515
Bach13g00807 911 Pfam WD domain, G-beta repeat 573 610 IPR001680 GO:0005515
Bach13g00807 911 Pfam WD domain, G-beta repeat 708 745 IPR001680 GO:0005515
Bach13g00807 911 Pfam WD domain, G-beta repeat 532 567 IPR001680 GO:0005515
Bach13g00807 911 ProSiteProfiles Trp-Asp (WD) repeats profile. 425 466 IPR001680 GO:0005515
Bach13g00807 911 MobiDBLite consensus disorder prediction 195 213 - -
Bach13g00807 911 FunFam WD repeat-containing protein 44 518 784 - -
Bach13g00807 911 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 537 571 - -
Bach13g00807 911 SUPERFAMILY WD40 repeat-like 421 746 IPR036322 GO:0005515
Bach13g00807 911 PANTHER WD REPEAT DOMAIN 44 6 908 IPR040324 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00807 Bach-Chr13 13490819 13496228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00807 524 742 U-box Gene Family AT1G04510 27.197 2.37e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00807 K20241 - qsa:O6P43_000927 1303.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g00807 13 13490819 13496228 Bach13g00807 13 13490819 13496228 ECH