Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00794 ATGGCACAAAATTTCTTTGAATCTGCATGCTTGGACTCTAATGGTGGTGTCTCGCACAAGAAAAATTTGAAATCCATTTCATCACAGACAACAGTATGTGCTAATGATAATGATTGCTTTGATTGCAATATTTGCTTGGACTCTGCGCATGACCCTGTGGTCACTCTTTGTGGTCACCTCTACTGCTGGCCATGCATATACAGGTGGCTTCAAGTCCAACGCTCCTCTGATGAATCAGAACAGCAGAAGTGCCCAGTTTGTAAAACCAACATCTCTTATACCTCATTAGTTCCCCTTTATGGCCGTGGAAATTCAGTTTCTGAAGCCAAGAGAACCCAGATGGGTCTGGGAATACCTAGAAGGCCACCTCCTTATAGCTTGAATTCAATGTTAAGTTCTATGAGTGCATCTACTTCTCATCCGGGTCAACGACTCCATCCAAATTATTTTCAGCCACAACCAGATCCATCTCAATATCAACAATACTTCCCTCAGCTTTACGGTGGTTATACTGCAAATGGATCACCTTATCATAGAGGTGGAGCTATGGCTGCTGTCTTTAGTTCCATGATCGGTATGTTTGGTGAGATGGTCTTTACAAGCATTTTTGGGAACTCGGATGCAAATTTGTTTTCTTACCGTTATGTAAATTCTTACCCTCATAGCAGAAGTAGCAGTCCTAGAATGAGAAGGCAGGAAATGCAGGTTTACAAATCTCTGAACAGGGTATCTATCTTTCTCCTCTGCTGTATCATTTTGTGTCTTCTCTTATTCTGA 777 0.4183 MAQNFFESACLDSNGGVSHKKNLKSISSQTTVCANDNDCFDCNICLDSAHDPVVTLCGHLYCWPCIYRWLQVQRSSDESEQQKCPVCKTNISYTSLVPLYGRGNSVSEAKRTQMGLGIPRRPPPYSLNSMLSSMSASTSHPGQRLHPNYFQPQPDPSQYQQYFPQLYGGYTANGSPYHRGGAMAAVFSSMIGMFGEMVFTSIFGNSDANLFSYRYVNSYPHSRSSSPRMRRQEMQVYKSLNRVSIFLLCCIILCLLLF 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00794 258 SUPERFAMILY RING/U-box 37 108 - -
Bach13g00794 258 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 26 255 IPR045103 GO:0005783|GO:0006511|GO:0061630
Bach13g00794 258 SMART ring_2 42 87 IPR001841 -
Bach13g00794 258 ProSiteProfiles Zinc finger RING-type profile. 42 88 IPR001841 -
Bach13g00794 258 CDD RING-HC_AtRMA-like 40 88 - -
Bach13g00794 258 ProSitePatterns Zinc finger RING-type signature. 57 66 IPR017907 -
Bach13g00794 258 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 16 147 IPR013083 -
Bach13g00794 258 Pfam RING-type zinc-finger 42 85 IPR027370 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00794 Bach-Chr13 13407780 13408556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00794 1 244 C3H Transcription Factor Family AT4G27470 41.406 7.73e-52 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00794 K10666 - qsa:O6P43_029094 272.322