Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00791 ATGGCTGAGCTCACAGAATTGTTCCCCATTGGCAAATTATTCGAGGGCCTGCAGCCTCTTCTATACGAGCACACCATCACACCAGATCTTCCAACCTCCATTGTTTTCTGCATCATGGTCATGTTCTTCTTTCATCTCTGGTACCACATTCTCCGAGGTTTGTTTTTCTGGTACATCGGAAACGAGGTAATTGAGCAGCAAGAAGATGTTGAACCAGCTGGATTCCATTATGGTTTTCCTTCTGGACAGCATGAGATTTTTCAAGCTCTTGTGGAGACCAGTCTGCAGACATGGAGAATTGTTGGAAGATCAGAACGAGAGTTTAAGGTGAAACAAGGACAAAGGCTTAGAGATTCAAAGAAATTGCCTCCTCTGGTTAGCTATGGAAGCCATGATGAAGTAGGAAGAAACTGTGGTGACTGTGCCATTTGCTTGGAGGATTTTAAGGTTGGTGAGTTGTGTCAGGTTTTCCCAGAGTGTAGGCACATTTTTCATTCAGATTGCTTAGATTTCTGGTTACAGCGAAAGCTAACATGTCCAATCTGTCGTAGATTTATAGAAGACTAA 567 0.4303 MAELTELFPIGKLFEGLQPLLYEHTITPDLPTSIVFCIMVMFFFHLWYHILRGLFFWYIGNEVIEQQEDVEPAGFHYGFPSGQHEIFQALVETSLQTWRIVGRSEREFKVKQGQRLRDSKKLPPLVSYGSHDEVGRNCGDCAICLEDFKVGELCQVFPECRHIFHSDCLDFWLQRKLTCPICRRFIED 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00791 188 CDD RING-H2_PA-TM-RING 140 183 - -
Bach13g00791 188 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 102 187 IPR013083 -
Bach13g00791 188 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 33 184 - -
Bach13g00791 188 SUPERFAMILY RING/U-box 140 186 - -
Bach13g00791 188 Pfam Ring finger domain 140 183 IPR001841 -
Bach13g00791 188 SMART ring_2 141 182 IPR001841 -
Bach13g00791 188 ProSiteProfiles Zinc finger RING-type profile. 141 183 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00791 Bach-Chr13 13386314 13386880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00791 75 184 C3H Transcription Factor Family AT1G53010 38.261 1.44e-16 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00791 - - gmx:102660073 198.749