Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00766 ATGGCTCCAAGAGATAGAACCACCACTCTCGCCGGGTCCAGCCCGACCCATAACGCTAAAGAGATCCGATACAGAGGCGTCAGGAAGAGGCCTTGGGGACGCTATGCTGCTGAGATCCGTGACCCCGGGAAGAAGACTCGGGTTTGGCTTGGCACGTTTGACACAGCTGAGGAGGCCGCGCGTGCTTACGACACCGCTGCCAGAGAGTTCCGTGGGGTTAAAGCCAAAACCAACTTCCCCGCCCCATCTGAAATCGTAAATAACTCTGTTCAGAGTCCTAGCCAGAGCTCGACCCTCGACTCAGCGTCTCCGCCGCCGCCTCCCCCTGCGCTGGACCTGACACTCACTCCACTCTCCGCCGCCGGCGCTCTTGGGTTACCGGTGATGACGGTGGCACGACCTGTAATGTTTTTTGATGCTTTTGCTCGTGCGGAGACCATGGTTAACGTTGGACGGAGGGAGACGTGTGCTTTTGATAGACCCGTAGCTGATTTCCGTTACGCGGTTCATGGCGGCGGTGGGGCCCAGAGTGACTCTGATTCTTCCTCCGTCGTAGACTACGAGCGTCCCTCACCAAAAAGACTCTTAGATCTCGACCTCAATGGCCCTCCGCCGCCGGAGGTTGCTTGA 630 0.5825 MAPRDRTTTLAGSSPTHNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGVKAKTNFPAPSEIVNNSVQSPSQSSTLDSASPPPPPPALDLTLTPLSAAGALGLPVMTVARPVMFFDAFARAETMVNVGRRETCAFDRPVADFRYAVHGGGGAQSDSDSSSVVDYERPSPKRLLDLDLNGPPPPEVA 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00766 209 SUPERFAMILY DNA-binding domain 23 81 IPR016177 GO:0003677
Bach13g00766 209 Pfam AP2 domain 23 72 IPR001471 GO:0003700|GO:0006355
Bach13g00766 209 Gene3D AP2/ERF domain 22 81 IPR036955 GO:0003700|GO:0006355
Bach13g00766 209 SMART rav1_2 23 86 IPR001471 GO:0003700|GO:0006355
Bach13g00766 209 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Bach13g00766 209 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Bach13g00766 209 MobiDBLite consensus disorder prediction 83 99 - -
Bach13g00766 209 ProSiteProfiles AP2/ERF domain profile. 23 80 IPR001471 GO:0003700|GO:0006355
Bach13g00766 209 MobiDBLite consensus disorder prediction 171 209 - -
Bach13g00766 209 FunFam Ethylene-responsive transcription factor 2 23 81 - -
Bach13g00766 209 CDD AP2 23 81 IPR001471 GO:0003700|GO:0006355
Bach13g00766 209 MobiDBLite consensus disorder prediction 1 23 - -
Bach13g00766 209 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 18 185 - -
Bach13g00766 209 MobiDBLite consensus disorder prediction 83 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00766 Bach-Chr13 13198177 13198806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00766 11 194 AP2-EREBP Transcription Factor Family AT3G15210 56.863 1.04e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach13g00766 AP2 1.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00766 K09286 - qsa:O6P43_029132 235.728