LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach13g00706	ATGGCTTCATGTTCAAACAGTTTGGATCCAACGCTCAACTTATACCACAAAATGAAGACTGAGAAAATTAAAGAAGATGATATGCAGGAAAGTAATTTATTTGTGTTTGGAATTGCAGTGAAAGCTCTACAAGCAATATCGGATAAACTAGAGAACTTGAACTGGAAAGTTACACAACGTTCTTGCAGTGGGGATGGTGGATTCATGAACAGATATATTCAGCCGATTCCAGGGAATGATATTATCAGGAATGTCACATGCAATTGCACTTTTCAAAGTGGCACCGTCTGCCATGTTACAAATATCCGGCTGAGGGGTCTCAATTTATCTGGAGTCCTACCAAGTGAATTTGGAAATCTCACTCACCTGCAAGAACTTGATCTTGCACGTAATTATCTCAGTGGCTCAATCCCAACGAGTTTTGCACAGCTCCCTCTTTCAGTACTGACCCTCGTTGATAATCAACTTACTGGTTCAATTCCTGTCGAAATTGCTGATATTGCTAGCCTGGAGACACTGATCCTAGAAGATAATTTGTTTGGAGGACCCCTTCCTCCTGAGCTTGGTAATTTGGCCCAGTTACGGGGACTTACAATAGATGGGAACAGAATATCAGGAAAGATACCTAGTTTTATTGGGAACTGGACCAAACTTGAAAGACTGAAGTTGTGTATTTTTGGTAGAGATATGCAGGGCACATTTATGGAAGGTCCAATTCCAAACATTATAGGTCAATTGAAGAATTTGACCCAATTGAGAATATCTGATTTGAATGGACCATCATCTATAGCATTTCCTAATCTGAAGGAATTGAAAAGCTCGAAATATTTGATATTGAGAAATTGCAAAATCACTGGTCACATACCAGATTATATTGGTGAAATTGAAAACTTGGATACTTTAGACTTGAGCTTCAACAGGTTGACTGGTTCAATCCCAGATTCATTTCAGGACTTGCAAAGGCTACGTTTCATAGTTTGGTGTTTGAAGAGGGGTCTCCCTTGTGTAGGAAAGCCTCAATATGACTCTTTGTTTATAAACTGTGGAGGACCAAGGATGGAGTTTGAGGGAAATGAATATGATGAAGATCCTAACCCAGTGGGCTTTTCAAACTTTGTTTCTAAAGATAAATGGGCATATAGCAGCACCGGAGTATACATGGATAATAGTCGAGCTGGTCACATTGCAACAAATGAGAACATTACTGGTCCAGAGTACTACAAAACAGCTCGCCTTACCCCTCTGTCACTTAAGTACTATGGCCTTTGTTTGCTGAAGGGAAACTATAAAGTTAAGCTTTACTTCGCTGAAATACTGTATAGTAATGGCCAAACCTTTAGCAGTATAGGAAGGCGTATATTTGATGTCTCAATTCAAGGTAACTTATATTTGAAGGATTTTAACATTATGGAGGAAGCTGGAGGTGCTGGTAAGGGTATTACTAAGGAGTTTGATGTTGATGTTAATAATAGCACCCTGGAGATCCATTTATACTGGGCAGGGAAAGGAACCAGTGCAGTTCCTAATAGAGGAGTATATGGACCTCTTATATCTGCTATCACAGTAACCCCAAACTTTAAACTTGCTTCAAAGAAGCCGAGGGCTCCAGCTATTGTTGGAATTGCTGCTGCATCATGTTTGGTTCTCATACTGATTCTGGTGATTATTGTCCTTCGAAAGAAAGGTTTCCTAGGTGGGGAAAATCCAAAGGACAAAGGTCATGAAGAACAAAAGCTAAACTTGGATTGGCCTACACGAATGAGGATTTGTCTAGGGATAGCTAGGGGATTAGCTTATCTTCATGAGGAATCAAGGTTGAAAATAGTACACAGAGACATTAAGGCAACAAATGTCTTACTTGATAAGGATTTGAGTGCTAAAATCTCTGACTTTGGTTTAGCAAAGCTTGATGAAGAAGATAATACTCATATCAGCACACGAATAGCTGGAACAATAGGTTATATGGCTCCTGAATATGCTATGCGAGGTTACTTGACTGACAAGGCAGATGTTTATAGCTTTGGAGTTGTTGCTTTAGAAATTGTTAGTGGGAAGAATAACACAACTTATAGACCAAAGGAGGAGTTTACTTATCTTCTTGACTGGGCCTTTGTTCTCCAAGAGCAAGGAAACCTTATTGAACTGGTGGATCCAACTCTTGGTTCAAGCTACTCCCAAATTGAAGCCATGAGAATGCTGAACTTGGCACTCTTATGCGCCAACTCGTCGCCTTCTCTTAGACCATCAATGTCATCTGTTGTGAGTATGCTTGAAGGAAAAGCTCCAGTTGAAGTACCCATAAGAAAGCACAAGGATCTGAGTCATCATGCAAGCTTTAAAGCCTTTGAGACAACATCACCTAGTAGGCTTCTTCAGGATGACCCATGGATTGACTCCTCCATATCTCTTCCAAGTGCAAATGATGATTATTCCTCACCTAGTAGGCTTCTTCAGGATTCTGGTCCTGTAAATTTGTAG	2478	0.4011	MASCSNSLDPTLNLYHKMKTEKIKEDDMQESNLFVFGIAVKALQAISDKLENLNWKVTQRSCSGDGGFMNRYIQPIPGNDIIRNVTCNCTFQSGTVCHVTNIRLRGLNLSGVLPSEFGNLTHLQELDLARNYLSGSIPTSFAQLPLSVLTLVDNQLTGSIPVEIADIASLETLILEDNLFGGPLPPELGNLAQLRGLTIDGNRISGKIPSFIGNWTKLERLKLCIFGRDMQGTFMEGPIPNIIGQLKNLTQLRISDLNGPSSIAFPNLKELKSSKYLILRNCKITGHIPDYIGEIENLDTLDLSFNRLTGSIPDSFQDLQRLRFIVWCLKRGLPCVGKPQYDSLFINCGGPRMEFEGNEYDEDPNPVGFSNFVSKDKWAYSSTGVYMDNSRAGHIATNENITGPEYYKTARLTPLSLKYYGLCLLKGNYKVKLYFAEILYSNGQTFSSIGRRIFDVSIQGNLYLKDFNIMEEAGGAGKGITKEFDVDVNNSTLEIHLYWAGKGTSAVPNRGVYGPLISAITVTPNFKLASKKPRAPAIVGIAAASCLVLILILVIIVLRKKGFLGGENPKDKGHEEQKLNLDWPTRMRICLGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLSAKISDFGLAKLDEEDNTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKNNTTYRPKEEFTYLLDWAFVLQEQGNLIELVDPTLGSSYSQIEAMRMLNLALLCANSSPSLRPSMSSVVSMLEGKAPVEVPIRKHKDLSHHASFKAFETTSPSRLLQDDPWIDSSISLPSANDDYSSPSRLLQDSGPVNL	825

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach13g00706	825	Gene3D	Ribonuclease Inhibitor	40	224	IPR032675	-
	Bach13g00706	825	Gene3D	Ribonuclease Inhibitor	225	327	IPR032675	-
	Bach13g00706	825	FunFam	Probable LRR receptor-like serine/threonine-protein kinase At1g53440	39	201	-	-
	Bach13g00706	825	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	35	555	-	-
	Bach13g00706	825	Pfam	Leucine Rich Repeat	297	319	IPR001611	GO:0005515
	Bach13g00706	825	Pfam	Malectin domain	344	520	IPR021720	-
	Bach13g00706	825	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	608	620	IPR008271	GO:0004672\|GO:0006468
	Bach13g00706	825	ProSiteProfiles	Leucine-rich repeat profile.	297	320	IPR001611	GO:0005515
	Bach13g00706	825	Gene3D	Transferase(Phosphotransferase) domain 1	571	773	-	-
	Bach13g00706	825	SUPERFAMILY	Protein kinase-like (PK-like)	577	784	IPR011009	-
	Bach13g00706	825	FunFam	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase	341	525	-	-
	Bach13g00706	825	SUPERFAMILY	L domain-like	93	324	-	-
	Bach13g00706	825	Gene3D	-	343	525	-	-
	Bach13g00706	825	MobiDBLite	consensus disorder prediction	803	825	-	-
	Bach13g00706	825	Pfam	Protein tyrosine and serine/threonine kinase	576	756	IPR001245	GO:0004672\|GO:0006468
	Bach13g00706	825	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	569	769	-	-
	Bach13g00706	825	ProSiteProfiles	Protein kinase domain profile.	467	773	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach13g00706	825	Pfam	Leucine rich repeat	98	156	IPR001611	GO:0005515
	Bach13g00706	825	SMART	serkin_6	501	757	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach13g00706	Bach-Chr13	12607803	12613786	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach13g00706	573	807	Receptor kinase-like Gene Family	AT1G53440	69.291	1.22e-105	347

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Bach13g00706		PK_Tyr_Ser-Thr	2.3e-27	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach13g00706	-		-	egr:104451553	602.053