LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach13g00704	ATGGTCAACGTATTCAGCTCTAGTTGTTTGGTTTTCTTTCCTTCCAGTAAGAAGAATCCAGATGAACAGGATAGAGATCATCAGTCACTGATCTTCTTCAACCTTGATCTTGCTCGTAATTATCTCAGTAGTTCAATTCCGACGAGTTTTGCAAAGCTCCCTCTTTTGATACTGGCCCTCATTGATAATCGACTCAGTGGTTCAATTCCTGTTGAAATTGCTAATATTGCTAGCCTGGAGATACTGAACCTAGAAGATAATTTGTTTGGAGGACCCCTTCCTCCTGAGCTTGGTAATTTGGCCCAGTTACGGAGACTTACAACAGATGGGAACAGAATATCAGGAAAGATACCTAGTTTTATTGGGAACTGGACCAAACTTGAAAGACTGGATATGCAGGGCACATTTATGGAAGGTGCAATTCCAAATACTATAGCTCAATTGAAAATTTTGACTGAATTGAGAATATCTGATTTGAATGGACCATCTATGGCATTTCCTGATCTGAAGGAATTGAAAAACGTGAGATATTTGATATTGAGAACTTGCAAAATCGCTGATCAGATACCAGATTATATTGGTGAAATGGAAAAATTAGATACTTTAGACTTGAGCTTCAACAAGTTGACTGGTCCAGTTCCAGATTCATTTCAGGGCTTGGAAAGGTTACGTTTCATAGTTTGGTGTTTGAAGAGGAGTTTCCCTTGTTCAGGAAAGCCTCAATATGACTCCTTATTTATAAACTGTGGAGGGCCAAGAATGGAGTTTGAGGGGAGTGATTATGATGAAGACCTCAACCCAGAGGGCTTTTCAAACTTTGTTTCTAAAGACAAATGGGCGTACAGCAGCGCAGGAGTATATATGGATAATGATCGTGCTGCTCACATTGCAACAAGTGAGAACATTACCGGTCCAGAATACTACAAAACAGCCCGCCTTTCCCCTCTGTCCCTGAAGTACTATGGCCTTTGTTTGCTGAAGGGGAATTATAAAGTTAAGCTTCACTTTGCTGAAATACTGTATAGAAATGGCCAAACATTTAGTGGCATAGGAAGGCGCATATTTGACGTCTCAATTCAAGGTAATTTATATTTGAAAGATTTTAACATTATGGAGGAAGCTGGAGGTGCTGGTAAGGGCATCACTAAGGTGTTTGATGTTGATGTTAATAATAGCACCCTGGAGATCAACTTATACTGGGCAGGGAAAGGAACAACTGCAGTTCCTAACAGAGGGGTATATGGACCTCTTATATCTGCTATTACAGTAACCCCAAACTTTGAAATTTATTCAAAGGGAATGGGGGTTCAAGCAATTGTTGGAATTGCTGCTGCATCATGTTTGCTTCTCATACTGATTCTGATGATCATTGTCCTTCGAAAGAAGGGTTTCCTAGGTGGGGAAAATCCAAAGGACAAAGAACTTCTCAATCTCAAAACAGGTTATTTCAGTCTAAGACAAATTAAAGCAGCCACTGGTAACTTTGACCTAACAAATAAGATAGGCGAAGGAGGCTTTGGCCCAGTCTACAAGGGTGTGCTATCAGATGGTACTGTAATTGCTGTTAAGCAGCTCTCCTCCAAATCAAGGCAAGGGAACCGCGAATTTGTCAATGAAATAGGAATGATTACTGCTTTGCAACACCCAAATCTGGTGAACCTTTATGGCTGTTGCATTGAAGGAAACCAGTTGTTACTGATATATGAATACATGGAGAACAATTGTCTGGCCCGTGCGCTTTTTGGTCTTGAAGAGCAGAAGCTAAACTTGGACTGGCCTACAAGAATGAAGATTTGTCTGGGGATAGCTAGGGGGTTAGCTTATCTTCATGAGGAATCAAGGTTGAAAATAGTACACAGAGATATTAAGGCAACAAACATCTTACTTGATAAGGATCTAAATGCCAAGATCTCTGACTTTGGTTTAGCTAAGCTTGATGAAGAAGAAAATACTCATATCAGCACACGTATAGCTGGAACAATAGGTTATATGGCTCCAGAACATGCTATGCGAGGTTATTTGACTGACAAGGCAGATGTTTATAGCTTTAGAGTTGTTGCTTTAGAAATTGTTAGTGGGAAGAATAACACAACTTACAAGCCAAAGGAGGAGTTTACTTGTCTTCTTGACTGGGCCTTTGTTCTCCAAGAGCAAGGAAACCTTATTGAACTGGTGGATCCAACTCTTGGTTCAAGCTACTCCCTAATAGAGGCCATGAGAATGCTTAACTTGGCACTCTTGTGCGCCAACTCATCACCTTCTCGTAGACCATCAATGTCATCTGTGGTAAGTATGCTTAAAGGAAAAGCTCCAGTTAAGGCACCCATAAGCAAGCACGAGGATCTGAGCCTTCATGCTAGCTTTAAAGCCTTTGAGACCATACCACTGGACAGCCAAACACTGGTTTCTTCCACATTCTCACAAGAAAGCCTAGAACAGAGAGTCAAAGCAATGGATGGCCCATGGATTGAGTCCTCCACGTCTCTTACAAATGCAAATGATTATTCCTCGCCCAGTACGCTTCTTCAGGATTCTGGTCATGTAAATTTGTAG	2553	0.4097	MVNVFSSSCLVFFPSSKKNPDEQDRDHQSLIFFNLDLARNYLSSSIPTSFAKLPLLILALIDNRLSGSIPVEIANIASLEILNLEDNLFGGPLPPELGNLAQLRRLTTDGNRISGKIPSFIGNWTKLERLDMQGTFMEGAIPNTIAQLKILTELRISDLNGPSMAFPDLKELKNVRYLILRTCKIADQIPDYIGEMEKLDTLDLSFNKLTGPVPDSFQGLERLRFIVWCLKRSFPCSGKPQYDSLFINCGGPRMEFEGSDYDEDLNPEGFSNFVSKDKWAYSSAGVYMDNDRAAHIATSENITGPEYYKTARLSPLSLKYYGLCLLKGNYKVKLHFAEILYRNGQTFSGIGRRIFDVSIQGNLYLKDFNIMEEAGGAGKGITKVFDVDVNNSTLEINLYWAGKGTTAVPNRGVYGPLISAITVTPNFEIYSKGMGVQAIVGIAAASCLLLILILMIIVLRKKGFLGGENPKDKELLNLKTGYFSLRQIKAATGNFDLTNKIGEGGFGPVYKGVLSDGTVIAVKQLSSKSRQGNREFVNEIGMITALQHPNLVNLYGCCIEGNQLLLIYEYMENNCLARALFGLEEQKLNLDWPTRMKICLGIARGLAYLHEESRLKIVHRDIKATNILLDKDLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEHAMRGYLTDKADVYSFRVVALEIVSGKNNTTYKPKEEFTCLLDWAFVLQEQGNLIELVDPTLGSSYSLIEAMRMLNLALLCANSSPSRRPSMSSVVSMLKGKAPVKAPISKHEDLSLHASFKAFETIPLDSQTLVSSTFSQESLEQRVKAMDGPWIESSTSLTNANDYSSPSTLLQDSGHVNL	850

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach13g00704	850	Pfam	Protein tyrosine and serine/threonine kinase	497	766	IPR001245	GO:0004672\|GO:0006468
	Bach13g00704	850	SMART	serkin_6	495	773	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach13g00704	850	Pfam	Malectin domain	245	421	IPR021720	-
	Bach13g00704	850	Gene3D	Transferase(Phosphotransferase) domain 1	571	782	-	-
	Bach13g00704	850	SUPERFAMILY	Protein kinase-like (PK-like)	480	788	IPR011009	-
	Bach13g00704	850	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	34	797	-	-
	Bach13g00704	850	FunFam	probable LRR receptor-like serine/threonine-protein kinase At1g53430	467	570	-	-
	Bach13g00704	850	SUPERFAMILY	L domain-like	35	226	-	-
	Bach13g00704	850	FunFam	LRR receptor-like serine/threonine-protein kinase ERECTA	72	163	-	-
	Bach13g00704	850	Pfam	Leucine Rich Repeat	198	220	IPR001611	GO:0005515
	Bach13g00704	850	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	571	778	-	-
	Bach13g00704	850	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	617	629	IPR008271	GO:0004672\|GO:0006468
	Bach13g00704	850	ProSiteProfiles	Protein kinase domain profile.	495	782	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach13g00704	850	MobiDBLite	consensus disorder prediction	829	850	-	-
	Bach13g00704	850	Gene3D	Ribonuclease Inhibitor	28	228	IPR032675	-
	Bach13g00704	850	Gene3D	Phosphorylase Kinase; domain 1	465	570	-	-
	Bach13g00704	850	CDD	STKc_IRAK	501	768	-	-
	Bach13g00704	850	FunFam	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase	242	426	-	-
	Bach13g00704	850	Gene3D	-	244	426	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach13g00704	Bach-Chr13	12585925	12594050	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach13g00704	35	843	Receptor kinase-like Gene Family	AT1G53440	55.752	0.0	944

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Bach13g00704		PK_Tyr_Ser-Thr	1.6e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach13g00704	-		-	gmx:100815226	1063.91