Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00699 ATGGCTCTGCTCTGTGGCTCAACTTCAGTGACGGTCCCTTCATCCTCAGCTAAACCTTCATTTACTTCTTCGAAGAATGGAATTGCTAAAACCTCATTTGTTGGATTCCAATTGGCATTATCAAAGCCTTCTATTCGGACCAATTTTCCTTCCAGTTCCAGGGAAAATTTTCAGGTCCGTTGCCAGGACCTCTCCATCGTCCCAAAAGATGAACGTTGGATGTTCGAGGAATCCGAACTCAGTGGTCCGGACATTTGGAATAAGACCTGGTATCCAAAAGCAGCAGATCATGTAAATACAGATAAACCATGGTACATCGTTGATGCTACAGATAAAATCCTCGGAAGACTAGCATCAACAATAGCTGTTTACATCCGAGGGAAAAACCTGGCAACCTATACTCCCAGCGTGGATATGGGTGCACATGTAATTGTGGTGAATGCAGAAAAGGTTGCTGTATCTGGGAAAAAGAGGACTCAAAAACTTTATAGGAGGCATTCTGGACGACCTGGTGGAATGAAAGTGGAAACATTTGATCAACTACAGCAGAGAATTCCTGAAAGAATTATTGAACATGCTGTTCGAGGCATGCTTCCAAAAGGGAGGCTTGGCCGACAACTCTTCACCCACCTCAAGGTTTATGAGGGTCCAAATCATCCACATGAAGCCCAGAAGCCCATCGAGTTGCCCTTAACGGACAAGAGAATACAGAAGCAAAGATAG 723 0.444 MALLCGSTSVTVPSSSAKPSFTSSKNGIAKTSFVGFQLALSKPSIRTNFPSSSRENFQVRCQDLSIVPKDERWMFEESELSGPDIWNKTWYPKAADHVNTDKPWYIVDATDKILGRLASTIAVYIRGKNLATYTPSVDMGAHVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEHAVRGMLPKGRLGRQLFTHLKVYEGPNHPHEAQKPIELPLTDKRIQKQR 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00699 240 MobiDBLite consensus disorder prediction 7 23 - -
Bach13g00699 240 FunFam 50S ribosomal protein L13 87 231 - -
Bach13g00699 240 SUPERFAMILY Ribosomal protein L13 98 231 IPR036899 GO:0003735|GO:0005840|GO:0006412
Bach13g00699 240 Gene3D Ribosomal protein L13 93 236 IPR036899 GO:0003735|GO:0005840|GO:0006412
Bach13g00699 240 Hamap 50S ribosomal protein L13 [rplM]. 104 230 IPR005822 GO:0003735|GO:0005840|GO:0006412
Bach13g00699 240 PANTHER RIBOSOMAL PROTEIN L13 90 238 IPR005822 GO:0003735|GO:0005840|GO:0006412
Bach13g00699 240 NCBIfam 50S ribosomal protein L13 98 229 IPR005823 GO:0003735|GO:0005840|GO:0006412
Bach13g00699 240 CDD Ribosomal_L13 104 217 IPR005822 GO:0003735|GO:0005840|GO:0006412
Bach13g00699 240 MobiDBLite consensus disorder prediction 1 23 - -
Bach13g00699 240 ProSitePatterns Ribosomal protein L13 signature. 194 216 IPR023563 GO:0003735|GO:0005840|GO:0006412
Bach13g00699 240 Pfam Ribosomal protein L13 103 220 IPR005822 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00699 Bach-Chr13 12534742 12538100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00699 106 230 Cytoplasmic Ribosomal Protein Gene Family AT3G07110 31.061 1.19e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00699 K02871 - qsa:O6P43_001091 420.239