Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00691 ATGGATGCTGGATTCCATGACTTACCTCTTCTGAAACGATTGAGAATCATCCAACAACAAGAACAAAAGCTTCAGCAACAGCAGGAGCAAAGACCCTTACCCACAAAGAAGCGAAAGGAGACGCGGGACTCGACATTTTTGCCAGACCCACCAGTTTCTACCTCTGCCACTGCTTATTCTTTGCCTGCTAAGAAAAGGGTATGGGCGCTTCAACCTGAATCTACTCCCATTTTATCTGTTTCCGAATCCCTCTTTGATCTCAATGTTGAATATAAACCATCTGTTGAGGAGGAGATTAGCCTAATAAATGATGAACCCAATAATGAGATCCTAGTGGTAGCCGATTCTGCTAATCAATCTATTCAAAACCCCCATGATGAAAAGGAAGAAGATAGAGATGAAGAGATCGATAGTGATGACGATGATGGGATTGTATGTGCCATTTGTGATAGCACAGATGGTGACCCCACGGATCCAATTGTTTTCTGTGATGGGTGTGATTTAATGGTGCACGCCACTTGCTATGGCAATCCCCTGGTTAACGGTGTACCAGAAGGTGACTGGTTTTGTAATCAGTGCCTGGCTCTGTCGACTTCTAACACTAAGAAGGGTGAAAAGGGTTTTTCTTGCTGCCTCTGCCCTGTCAAAGAAGGGGCAATGAAACTCACAACTGATGGGAAGTGGGCGCATATTGTCTGTGCTCTTTTTGTCCCTGAGGTGTTTTTTGGAGACCCAGAAGGCAGAGAGGGAATTGATTGTTCTCAGGTTCCCAGTAAGAGGTGGTCGGAGAAATGTTACATTTGCAATACTTTAAATGGGTGTGCTATTGTGTGCTCCGAGTCAAAATGCCCTTTAGCTTTCCATGTTACTTGTGGATTGAAAGAGGATCTTAGCATTGAGTACAAAGAAGAGAAGAGTGCTACTATTGTTGCTGGTTTCTGCAAAACCCACACTGAAATATGGAAAAAGCAACAGCAATCTGGAAAATATAAAATAGTTGCTGCCCAATAG 1011 0.4352 MDAGFHDLPLLKRLRIIQQQEQKLQQQQEQRPLPTKKRKETRDSTFLPDPPVSTSATAYSLPAKKRVWALQPESTPILSVSESLFDLNVEYKPSVEEEISLINDEPNNEILVVADSANQSIQNPHDEKEEDRDEEIDSDDDDGIVCAICDSTDGDPTDPIVFCDGCDLMVHATCYGNPLVNGVPEGDWFCNQCLALSTSNTKKGEKGFSCCLCPVKEGAMKLTTDGKWAHIVCALFVPEVFFGDPEGREGIDCSQVPSKRWSEKCYICNTLNGCAIVCSESKCPLAFHVTCGLKEDLSIEYKEEKSATIVAGFCKTHTEIWKKQQQSGKYKIVAAQ 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00691 336 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 207 320 IPR013083 -
Bach13g00691 336 ProSiteProfiles Zinc finger PHD-type profile. 143 196 IPR019787 -
Bach13g00691 336 SMART PHD_3 264 318 IPR001965 -
Bach13g00691 336 SMART PHD_3 145 194 IPR001965 -
Bach13g00691 336 PANTHER PHD FINGER PROTEINS 44 318 - -
Bach13g00691 336 Pfam PHD-finger 145 194 IPR019787 -
Bach13g00691 336 ProSiteProfiles Extended PHD (ePHD) domain profile. 207 318 IPR034732 -
Bach13g00691 336 Pfam PHD-zinc-finger like domain 209 317 - -
Bach13g00691 336 SUPERFAMILY FYVE/PHD zinc finger 119 194 IPR011011 -
Bach13g00691 336 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 206 IPR013083 -
Bach13g00691 336 MobiDBLite consensus disorder prediction 21 54 - -
Bach13g00691 336 CDD PHD_BRPF_JADE_like 145 193 - -
Bach13g00691 336 MobiDBLite consensus disorder prediction 116 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00691 Bach-Chr13 12460993 12462104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00691 1 336 C2H2 Transcription Factor Family AT3G14740 54.441 1.19e-118 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bach13g00691 zf-HC5HC2H_2 5.3e-30 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00691 K11380 - qsa:O6P43_001103 427.172