Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00684 ATGGCGCACGTTAGCCAGCTCCCTCTCAACGCCGACGGCGTATGTATGGTCTGCAAGGCCAAGCCGGCGGAGGAGACAGACAAACTTACTTGCAAGACGTGCGCTACACCGTGGCATTCTGTTTGCCTTGCTTCTCGGCCGGCGACCCTGGCGGAGATCCTTCAGTGGGAGTGTCCGGATTGTTCATCTCCAACCAATGATCTTGCTCCTGTTTCTGCCGGCGATGCCTTGATCGACGGCACTGGTGGTGGTTCCACAGAGCTAATAGCCGCGATTCGAGCCATAGAGGCGGATACTAAGCTCACTGAGCAAGAGAAGGCTCGCAAGCGTCAACAGCTAATGAACGGAAAAGCGGCCTGTGAAGACGGGGATGACGACGAGTACAACGACGATGATGAAAAAAAGAAGGATAATGGTGAAGCGAATGATATGCTGAACGTTTTAAGTGAGACCTTCAAATGCTCCTTCTGTATGCAGTTACCAGAGAGGCCAGTCACGACACCCTGTGGCCACAATTTCTGTTTGAAATGCTTCCAAAAATGGATCGGACAAGGGAAACAGACTTGTGCAAAGTGCCGCAGCACCATCCCTCAGAAAGTGTCAAGCCAACCCCGTATTAATTCTGCGCTTGTAGCTGCTATTAGAATGGCAAAGATCTCGAAGAGTGTTACTTCTGTAGAGCCTTCCAGAGTTTTTCATTGTCTACATAACCAAGACAGGCCGGACAAGGCATATGCCACGGAGAGGGCAAAAAGGAGTGGGAAGTCTAATGCTGCAAGTGGAAAAATTTTTGTAACTGTGCCACAGGACCATTTTGGGCCAATCCCGGCTGAGAATGATCCAGTGCAAAATAGAGGCGTGCTTGTTGGTGACTCGTGGGAGGACAGGTTAGAATGTCGGCAGTGGGGTGTACACTTCCCACATGTTAGTGGCATCGCTGGTCAGTCCAATCATGGTGCACAATCAGTTGTTCTATCAGGAGGTTATGTGGACGATGAGGACCATGGAGAGTGGTTTCTCTACACTGGAAGTGGTGGTAGGGATTTAAGTGGCAACAAACGAACAAACAAGGAGCAGTCTTTTGATCAAACCTTTGAAAAGTACAACAAGGCTCTTCAAGTTAGTTGTCTGAAGGGTTATCCTGTTCGAGTTGTGAGATCTCACAAAGAGAAACGTTCGTCATATGCCCCTGAGAAAGGATTGCGGTATGACGGAGTTTATAGAATAGAGAAGTGTTGGCAAAAAGTGGGACAGCAGGGTTCTTTCAAGGTTTGCCGGTTTTTGTTCATCAGATGTGATAATGAACCTGCTCCTTGGACCAGCGATGACCATGGGGACAGGCCTAGGCCCTTGCCAGTAATCTCGGAGCTGAAGAAGGTGGAAAAAGTAATTGAAAGGAAAGAAACTCCTTCTTGGGACTTTGATGAGAAAGAGTCTCGCTGGAGTTGGAAGAAATCTCAACCTCCCAGCCAAAAACCGGTCAAAAGTGCAGATCCCAATGACATAGAAAGGGCAAGAAGGCATTTTAAGAAATCCCAAAATTTATCAGTCAGAGAGAAACTGCTTAGAGAGTTCAGTTGCTCCATCTGCAGGCAGGTTATGGTTTCACCAGTGACAACGCCATGTGCTCATAATTTCTGCAAGTCTTGTTTGGAAGGTAAATTCGAGGGTCAGAGTTTTGTGAAAGACAGAAGCAGAGGAGGAAGATCGCTTCGATCCCAGAAGAATGTGATGAAATGTCCTTCTTGCATTATTGACATAGCTGATTTTCTTCAGAACATTCAGGTTAATAGAGAGTTGATGGGTTTGATTGAGTCATTGAAAGCCAAGGCTGAGGAGGCTGAAGAAAATGGTGAGTCAAAGGACTCGAGTGAGGACGGCTGTGATGAAAATGATGAAGAGAAGGATGAAGGCAATGGTTCAGATGAAGTTATGCAGGATCCTCCAATTGAGCCTGAGCAAAATCTCAGTGAGGAGAATAAAAATTCTGAAGAGCACCACAATGGTTCAGCTAAAGAGCTTGAAGTGGCCAATGAGGTGACAGTTCTTGAAGGGAAACGCAATACAAAAAGAAAGAAAGCGGGAGAACTCACTCTTAAAAGGGCTGGTGGTAAAAAAGCTAGAAAAGGCAAAAAGGCTAAGGAGGAAGCATCAGATGAAGGGAATGATTCACCTTCAAGTCCTCTCAATCTGTCAGCAGACATTGACTTGGAGTAAGAGCTTTTAATGATTGAACCATCACAGATCTTTTAAACTCTGACATAATGCCGTCAAATTTTGGTGCTCTTTCAAGTTCTGATGGTTCAATTTTCTAGTTTTGGAGGTGCTAAGTGAGGATTATACACTTGAATTAGCGATTAAATTTTTATCTATTTTTGGTTTTGCTCAAGTGTGTACTGTGTACAGCTTGCAAAGTCTGTTGTATGACTTTGAAAGGTATTACATTTCCTGGTTTAAGTAATGTAGAACTATGCAAAATCTA 2482 0.4529 MAHVSQLPLNADGVCMVCKAKPAEETDKLTCKTCATPWHSVCLASRPATLAEILQWECPDCSSPTNDLAPVSAGDALIDGTGGGSTELIAAIRAIEADTKLTEQEKARKRQQLMNGKAACEDGDDDEYNDDDEKKKDNGEANDMLNVLSETFKCSFCMQLPERPVTTPCGHNFCLKCFQKWIGQGKQTCAKCRSTIPQKVSSQPRINSALVAAIRMAKISKSVTSVEPSRVFHCLHNQDRPDKAYATERAKRSGKSNAASGKIFVTVPQDHFGPIPAENDPVQNRGVLVGDSWEDRLECRQWGVHFPHVSGIAGQSNHGAQSVVLSGGYVDDEDHGEWFLYTGSGGRDLSGNKRTNKEQSFDQTFEKYNKALQVSCLKGYPVRVVRSHKEKRSSYAPEKGLRYDGVYRIEKCWQKVGQQGSFKVCRFLFIRCDNEPAPWTSDDHGDRPRPLPVISELKKVEKVIERKETPSWDFDEKESRWSWKKSQPPSQKPVKSADPNDIERARRHFKKSQNLSVREKLLREFSCSICRQVMVSPVTTPCAHNFCKSCLEGKFEGQSFVKDRSRGGRSLRSQKNVMKCPSCIIDIADFLQNIQVNRELMGLIESLKAKAEEAEENGESKDSSEDGCDENDEEKDEGNGSDEVMQDPPIEPEQNLSEENKNSEEHHNGSAKELEVANEVTVLEGKRNTKRKKAGELTLKRAGGKKARKGKKAKEEASDEGNDSPSSPLNLSADIDLE 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00684 738 SUPERFAMILY RING/U-box 520 609 - -
Bach13g00684 738 ProSiteProfiles Zinc finger RING-type profile. 527 583 IPR001841 -
Bach13g00684 738 Gene3D - 253 452 IPR036987 -
Bach13g00684 738 Pfam Zinc finger, C3HC4 type (RING finger) 154 192 IPR018957 GO:0046872
Bach13g00684 738 SUPERFAMILY FYVE/PHD zinc finger 8 66 IPR011011 -
Bach13g00684 738 ProSiteProfiles Zinc finger PHD-type profile. 12 64 IPR019787 -
Bach13g00684 738 MobiDBLite consensus disorder prediction 611 738 - -
Bach13g00684 738 FunFam E3 ubiquitin-protein ligase ORTHRUS 2 253 449 - -
Bach13g00684 738 Pfam SAD/SRA domain 284 434 IPR003105 -
Bach13g00684 738 ProSitePatterns Zinc finger PHD-type signature. 15 61 IPR019786 -
Bach13g00684 738 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 4 631 IPR045134 -
Bach13g00684 738 ProSiteProfiles YDG domain profile. 282 431 IPR003105 -
Bach13g00684 738 Coils Coil 597 624 - -
Bach13g00684 738 Pfam RING-type zinc-finger 527 581 IPR027370 -
Bach13g00684 738 MobiDBLite consensus disorder prediction 108 139 - -
Bach13g00684 738 SUPERFAMILY RING/U-box 145 216 - -
Bach13g00684 738 SUPERFAMILY PUA domain-like 257 452 IPR015947 -
Bach13g00684 738 MobiDBLite consensus disorder prediction 479 501 - -
Bach13g00684 738 MobiDBLite consensus disorder prediction 618 640 - -
Bach13g00684 738 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 506 631 IPR013083 -
Bach13g00684 738 CDD RING-HC_ORTHRUS_rpt1 150 197 IPR047498 -
Bach13g00684 738 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 63 IPR013083 -
Bach13g00684 738 SMART PHD_3 14 62 IPR001965 -
Bach13g00684 738 FunFam Predicted protein 104 219 - -
Bach13g00684 738 ProSiteProfiles Zinc finger RING-type profile. 154 193 IPR001841 -
Bach13g00684 738 MobiDBLite consensus disorder prediction 684 721 - -
Bach13g00684 738 ProSitePatterns Zinc finger RING-type signature. 542 551 IPR017907 -
Bach13g00684 738 SMART G9a_1 277 435 IPR003105 -
Bach13g00684 738 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 100 221 IPR013083 -
Bach13g00684 738 MobiDBLite consensus disorder prediction 657 673 - -
Bach13g00684 738 SMART ring_2 154 192 IPR001841 -
Bach13g00684 738 SMART ring_2 15 61 IPR001841 -
Bach13g00684 738 SMART ring_2 527 583 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00684 Bach-Chr13 12397358 12402160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00684 1 615 C2H2 Transcription Factor Family AT5G39550 59.968 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00684 K10638 - qsa:O6P43_017375 963.755