Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00653 ATGCTTATATTTGTAGGCAACGTGCAAGGAGCAATGACTTCTCTGGCTTCCCCCGTGAGCTTGGGAAGTCTAGTTGGTGTGAGTTCATCCGGAAGGTCCCGCTCTGTTGTGAGGAGAGTTTCATTTTCTAGAGGAAACTTTAGAGGTAGAAAGAGATGGCATTGTGTCTCCTTGTCAATTTGTAAATATTCAGTGACAACAACTGATTTTATTGCTGACCAAGGCCATGCAGTTTCCTTTGATTCCAACAACAATAGTGGAAGTAAAGGTGCAGATGGTGATGCTGGTTTTCTCCTTATGCCTCCTCCCAAGCCTGTATTGAAGTCCTCAGAGGCCAAGGGTAACTCTGGTTTAGGCATGAAATCTGAGGCTCGGGCCCCTTCAGAAGTGAGTGAGGATTCCGATGATGTAAAGTTAGATGATGAAGAAGAGCGGAAAAAAGTAATCGAGTCACTTGGTGATGTATTGGAGAAGGCAGAGAAACTAGAAAGATCTAACTTCGATGATAAGAGAAATAATGTAGCTGTAAACAAACCAATGGTATCTAATACAACTGCTAATCCCAGGACTGATAGACCTGTAAGATCAACAGAAAATCGGAAGGCTAAAACCATGAAGAGTGTTTGGCGTAAAGGGGACGCAATTGCAAATGTGCAGAAGGTCACAAAGGAAGTACCCAAGCCTAATATTAAAATTGAAGGAGAGAAGTCTCAAACAGGAGATGGGGAAAAGGTAACTTCTCAGTCTCGTGCTCCTGTTAGAGCTCCTCAGCCACCTTCAAGACCTCAACCTATGTTACAAGGTAAACCTTCAATAGCTCCCCCACCCATCAAAAAACCTGTTGTCTTGAAGGATAAGGGTGCAGTTGATACACCTGTTAAGACTAAAGAGAGAAAGCCAATTTTGATTGACAAGTTTGCCAGCAAGAAACCAGTTGTTGATCCTCTAATTGCTCAAGCAGTTCTAGCTCCTGCAAAACCTGGAAAGGGCCCTCCACCTGGAAAATTTAGAGATGTGCACCGAAAAAAAGGTGCTCCAAATGGAGGAGGACCAAGAAGACGCATTGTAGATGATGATGTTCCAGATGAGGATGCATCAGAACTCAATGTCTCCATTCCTGGTGCCACAACAGCAAGGAAAGGGAGAAAATGGAGTAAAGCCAGCCGAAAAGCAGCAAGACTCCGGGCTGCCAAGGATGCAGCTCCTGTCAAAGTAGAAATTCTTGAGGTCAGTGATAAAGGTATGCTGATTGAGGAGTTAGCCTACAACTTGGCCATCAGTGAAGGTGAAATCCTGGGTTATTTATACTCCAAGGGAATTAAACCAGATGGAGTGCAAACATTGGATCAAAATATGGTGAAGATGATCTGTAAGGAATATGGTGTGGAAGTCATAGATACTGATCCTGTCAAATTTGAAGAGTTGGTAAAGAAAAGGGAAATTCTTGATGAAGCTGATATTAACAAACTCAAATATAGGCCTCCTGTCATTACTATAATGGGTCATGTGGATCATGGCAAGACAACTCTTTTGGATTATATTCGGAAGGCCAAGGTAGCTGCTTCAGAAGCTGGTGGGATTACACAAGGAATTGGGGCATATAAGGTGCAAGTACCTGTTGACGGAAAACTTCTCCCTTGTGTTTTCCTTGATACTCCTGGTCATGAGGCATTTGGGGCAATGAGAGCTCGTGGAGCTAGTGTGACAGACATTGCTATCATTGTTGTGGCTGCTGATGATGGAATTCGCCCTCAAACAAATGAAGCCATAGCTCATGCCAAAGCAGCAGGAGTACCTCTAATTATTGCTATAAACAAGGCATGCCAACAGATGTACAAAGATGGAGCAAATCCAGAAAGAGTGATGCAAGAGCTTTCTTCAATTGGTCTAATGCCAGAAGACTGGGGTGGTGACATCCCAATGGTTCAGATAAGTGCTCTTAGAGGGGAGAATATAGATGATCTTTTGGAAACTGTTATGCTTGTGGCTGAGTTACAAGAGCTGAAAGCTAATCCTGATAGAGGTGCAAAGGGGACAGTCATTGAGGCAGGTCTTGATAAATCAAAAGGGCCATTTGCTACATTTATTGTGCAGAACGGCACCCTTAAAAGAGGGGATATACTAGTTTGTGGAGAAGCCTTTGGAAAGGTGAGGGCTTTATTTGATGATAGTGGAAAACGTGTTGATGCAGCTACACCCTCTATACCAGTACAGGTTATTGGATTGAATAATGTTCCAATTGCTGGTGATGAATTTGAGGTTGTTGACTCCCTTGATGCTGCACGTGAAAAGGCAGATGCCCGTGCTGAGTCATTGCGAAATGAGCGTATTTCAACCAAGGCAGGGGATGGCAGGGTCACCCTTTCTTCCTTAGCTTCTGCAGTTTCAGCAGGAAAGCTTTCTGGGCTTGACTTGCACCAACTAAATATTATCTTGAAAGTTGATCTTCAGGGATCCATTGGAGCTGTTAGACAAGCACTACAGGTGCTCCCACAGGTTAATGTCACATTGAAGTTCCTATTGGAAGCAACAGGTGATGTAGGCACCAGTGATGTTGACCTTGCATTTGCAAGCAAAGCTATTATTTTGGGATTTAATGTCAGAGCACCAGGTTCTGTGAAAAGTTATGCAGAGAATAAAGGTGTGGAGATTAGATTGTATGAAGTCATTTATGAACTAATTGATGATGTGCGAAAAGCAATGGAAGGACTCCTAGAATCTGTTGAGGAACAAGTAACAATTGCCTCAGCAGAAGTACGGGCTACTTTCAGCAGTGGAAGTGGTCGAGTTGCTGGATGCATGGTTACAGAGGGAAAGGTACTGAAAGGCTGTGGCATTAGAGTCATTCGAAAGGGCAAAGTAGTTCATGTTGGTATTCTTGATTCTTTGAGACGCGTGAAGGAGATTGTGAAAGAGGTAAGTGCTGGTCTGGAATGTGGGCTTGGATTGGAAGACTATGATGATTGGCAGGAAGGAGATATTCTTGAGGCCTTCAACACAGTTCAAAAGAGGCGAACCCTTGAAGAGGCATCAGCATCAATGGCAGCTGCAGTGGAAGGAGTAGGAGCTTAA 3072 0.4365 MLIFVGNVQGAMTSLASPVSLGSLVGVSSSGRSRSVVRRVSFSRGNFRGRKRWHCVSLSICKYSVTTTDFIADQGHAVSFDSNNNSGSKGADGDAGFLLMPPPKPVLKSSEAKGNSGLGMKSEARAPSEVSEDSDDVKLDDEEERKKVIESLGDVLEKAEKLERSNFDDKRNNVAVNKPMVSNTTANPRTDRPVRSTENRKAKTMKSVWRKGDAIANVQKVTKEVPKPNIKIEGEKSQTGDGEKVTSQSRAPVRAPQPPSRPQPMLQGKPSIAPPPIKKPVVLKDKGAVDTPVKTKERKPILIDKFASKKPVVDPLIAQAVLAPAKPGKGPPPGKFRDVHRKKGAPNGGGPRRRIVDDDVPDEDASELNVSIPGATTARKGRKWSKASRKAARLRAAKDAAPVKVEILEVSDKGMLIEELAYNLAISEGEILGYLYSKGIKPDGVQTLDQNMVKMICKEYGVEVIDTDPVKFEELVKKREILDEADINKLKYRPPVITIMGHVDHGKTTLLDYIRKAKVAASEAGGITQGIGAYKVQVPVDGKLLPCVFLDTPGHEAFGAMRARGASVTDIAIIVVAADDGIRPQTNEAIAHAKAAGVPLIIAINKACQQMYKDGANPERVMQELSSIGLMPEDWGGDIPMVQISALRGENIDDLLETVMLVAELQELKANPDRGAKGTVIEAGLDKSKGPFATFIVQNGTLKRGDILVCGEAFGKVRALFDDSGKRVDAATPSIPVQVIGLNNVPIAGDEFEVVDSLDAAREKADARAESLRNERISTKAGDGRVTLSSLASAVSAGKLSGLDLHQLNIILKVDLQGSIGAVRQALQVLPQVNVTLKFLLEATGDVGTSDVDLAFASKAIILGFNVRAPGSVKSYAENKGVEIRLYEVIYELIDDVRKAMEGLLESVEEQVTIASAEVRATFSSGSGRVAGCMVTEGKVLKGCGIRVIRKGKVVHVGILDSLRRVKEIVKEVSAGLECGLGLEDYDDWQEGDILEAFNTVQKRRTLEEASASMAAAVEGVGA 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00653 1023 CDD IF2_mtIF2_II 676 770 IPR044145 -
Bach13g00653 1023 SUPERFAMILY Translation proteins 672 755 IPR009000 -
Bach13g00653 1023 Pfam Elongation factor Tu GTP binding domain 497 661 IPR000795 GO:0003924|GO:0005525
Bach13g00653 1023 NCBIfam translation initiation factor IF-2 414 1007 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Bach13g00653 1023 MobiDBLite consensus disorder prediction 255 277 - -
Bach13g00653 1023 PRINTS GTP-binding elongation factor signature 600 609 IPR000795 GO:0003924|GO:0005525
Bach13g00653 1023 PRINTS GTP-binding elongation factor signature 548 558 IPR000795 GO:0003924|GO:0005525
Bach13g00653 1023 PRINTS GTP-binding elongation factor signature 496 509 IPR000795 GO:0003924|GO:0005525
Bach13g00653 1023 PRINTS GTP-binding elongation factor signature 564 575 IPR000795 GO:0003924|GO:0005525
Bach13g00653 1023 MobiDBLite consensus disorder prediction 283 298 - -
Bach13g00653 1023 Gene3D Translation factors 909 1006 - -
Bach13g00653 1023 FunFam Translation initiation factor IF-2 672 790 - -
Bach13g00653 1023 FunFam Translation initiation factor IF-2 804 909 - -
Bach13g00653 1023 Pfam Translation initiation factor IF-2, N-terminal region 417 463 IPR006847 -
Bach13g00653 1023 Coils Coil 755 775 - -
Bach13g00653 1023 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 204 1012 IPR015760 -
Bach13g00653 1023 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 488 672 IPR027417 -
Bach13g00653 1023 MobiDBLite consensus disorder prediction 323 367 - -
Bach13g00653 1023 MobiDBLite consensus disorder prediction 175 298 - -
Bach13g00653 1023 SUPERFAMILY Translation proteins 911 1005 IPR009000 -
Bach13g00653 1023 MobiDBLite consensus disorder prediction 226 240 - -
Bach13g00653 1023 FunFam Translation initiation factor IF-2 489 671 - -
Bach13g00653 1023 Gene3D - 804 908 IPR036925 -
Bach13g00653 1023 CDD mtIF2_IVc 916 997 - -
Bach13g00653 1023 FunFam Translation initiation factor IF-2 909 1006 - -
Bach13g00653 1023 Gene3D - 489 671 IPR027417 -
Bach13g00653 1023 Pfam Translation-initiation factor 2 804 897 IPR023115 -
Bach13g00653 1023 Hamap Translation initiation factor IF-2 [infB]. 7 1005 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Bach13g00653 1023 Gene3D Translation factors 672 786 - -
Bach13g00653 1023 MobiDBLite consensus disorder prediction 176 192 - -
Bach13g00653 1023 CDD IF2_eIF5B 495 665 - -
Bach13g00653 1023 MobiDBLite consensus disorder prediction 91 142 - -
Bach13g00653 1023 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 492 669 IPR000795 GO:0003924|GO:0005525
Bach13g00653 1023 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 803 913 IPR036925 -
Bach13g00653 1023 NCBIfam small GTP-binding protein domain 495 659 IPR005225 GO:0005525
Bach13g00653 1023 ProSitePatterns Initiation factor 2 signature. 958 980 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Bach13g00653 1023 MobiDBLite consensus disorder prediction 193 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00653 Bach-Chr13 12014946 12022399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00653 493 895 Eukaryotic Initiation Factors Gene Family AT1G76810 30.556 1.13e-30 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00653 K02519 - gmx:100778924 1419.45