Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00635 ATGGCGAAACCTGGGCGAGGTCGTCGCTCACCGCCATCAGGCTCTGATTCGGCCTCTTCCTCTCGCTCCAGTTCTCGCTCTCGTTCGCTTTCTCGGCCTCGGTCTGTGTCCCGTTCCAAGTCCCCGTCTTCTTCGAGCTCTCTTTCTCGATCCAGATCCTTGTCTTCGTCGTCTTCTCGGTCCCGCAGTGACAGTTCTCGGAGTCGGAGCCCTCGTCCTCAGAGGAGGAAAATTCCTGCCGAAGCAGGTAGGCGAGGACGGTCTCCCCCGTCCCAGTCTAAAAGGACTTCTCCACCGCCAAGGAAACATTCTCCAGTTCGTGAGTCATTTGTTCTTCACGTAGACAAATTGAGCAGGAATGTCAATGAAGGCCATCTGAGAGAAATATTCAGTAACTTTGGTGAGGTTGTAAATGTGGAGCTGGTTATGGATCGATCTGTTAATCTTCCCAGAGGATATGGATATGTGGAGTTTAAGACAAAAGCAGATGCTGAAAAAGCCTTATTATACATGGATGGTGGTCAAATAGATGGGAATGTCGTTAAGGCAAGATTTACTCTACCTCCAAGACAAAGGGTTTCACCACCCCCAAAGGCATCAGCTGTTCCTCCAAAGAGAGATGCCCCCAGAACTGATAATGTTAGTGAAGATACTGAAAAGGATGGCCCAAAACGGCAAAGAGAACCTTCTCCTCGGAGAAAACCTTCCTCCCCACGAAGGAGATCTCCTGGTCCTCGAAGAGTTGGATCTCCAAGGCGGCCAGATTCTCCAGTTCGCCCACGTCGTCGATTGGACTCTCCTCCCTATCGTCGTGGAGACACACCTCCTAGGAGGAGGCCTTTGTCTCCTCCAAGAGGTCGTTCTCCATCTCCAGCAAGGCGCATTAGATCTCCTGCAAGAAGGTTGCGTGGAAGTCCAGGTCGCAGGCGTACACCTCCAAGGCGCCGTTCCCCATTCAGACGAGCTCATAGTCCTCCTAGAAGATCCCCTCTTACTCGTAGGCGCTCTCCTATACGCAGGCCTGCACGCTCACGTTCAAGATCCTTCTCACCACCACGAAGAGGTCGACCACCTGTAAGGCGTGGAAGCTCGTCATCCTACTCTGGTTCACCAAGCCCTCGGAAGGTATCGCGGAGATCAAGGAGTCGCAGTCCAAGAAGGCCTTTGAGAAAACGAGGCAGTAGCAACAGCAGCAGCAGCAGCTCTCCACCCCCACCTCGCAAACCCTAG 1230 0.5301 MAKPGRGRRSPPSGSDSASSSRSSSRSRSLSRPRSVSRSKSPSSSSSLSRSRSLSSSSSRSRSDSSRSRSPRPQRRKIPAEAGRRGRSPPSQSKRTSPPPRKHSPVRESFVLHVDKLSRNVNEGHLREIFSNFGEVVNVELVMDRSVNLPRGYGYVEFKTKADAEKALLYMDGGQIDGNVVKARFTLPPRQRVSPPPKASAVPPKRDAPRTDNVSEDTEKDGPKRQREPSPRRKPSSPRRRSPGPRRVGSPRRPDSPVRPRRRLDSPPYRRGDTPPRRRPLSPPRGRSPSPARRIRSPARRLRGSPGRRRTPPRRRSPFRRAHSPPRRSPLTRRRSPIRRPARSRSRSFSPPRRGRPPVRRGSSSSYSGSPSPRKVSRRSRSRSPRRPLRKRGSSNSSSSSSPPPPRKP 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00635 409 Gene3D - 6 194 IPR012677 -
Bach13g00635 409 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 110 188 IPR000504 GO:0003723
Bach13g00635 409 MobiDBLite consensus disorder prediction 186 409 - -
Bach13g00635 409 MobiDBLite consensus disorder prediction 65 83 - -
Bach13g00635 409 MobiDBLite consensus disorder prediction 12 64 - -
Bach13g00635 409 MobiDBLite consensus disorder prediction 294 350 - -
Bach13g00635 409 MobiDBLite consensus disorder prediction 209 235 - -
Bach13g00635 409 MobiDBLite consensus disorder prediction 376 390 - -
Bach13g00635 409 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 114 182 IPR000504 GO:0003723
Bach13g00635 409 MobiDBLite consensus disorder prediction 252 280 - -
Bach13g00635 409 FunFam Serine/arginine-rich splicing factor SR45 3 195 - -
Bach13g00635 409 SMART rrm1_1 111 184 IPR000504 GO:0003723
Bach13g00635 409 PANTHER RIBONUCLEIC ACID BINDING PROTEIN S1 2 272 - -
Bach13g00635 409 MobiDBLite consensus disorder prediction 361 375 - -
Bach13g00635 409 CDD RRM_RNPS1 112 184 IPR034201 -
Bach13g00635 409 MobiDBLite consensus disorder prediction 1 109 - -
Bach13g00635 409 SUPERFAMILY RNA-binding domain, RBD 98 197 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00635 Bach-Chr13 11886793 11890863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00635 112 185 Eukaryotic Initiation Factors Gene Family AT2G23350 31.081 1.51e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00635 K14325 - gmx:100783566 255.758