Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00633 ATGGTGAAGTTCCTGAAACCCAACAAGGCGGTGATAGTCTTGCAGGGCCGTTTCGCTGGCCGCAAAGCCGTTATAATCAAAAACTTCGACGACGGCACCCGCGACCGCCTCTACGGCCATTGCCTCGTTGCCGGAATCTCCAAGTATCCTTCTAAAGTAATTCGCAAGGATTCGGCGAAGAAAACCGCCAAGAAATCTCGTGTGAAGGCATTCATTAAGCTAGTCAACTACAACCATTTGATGCCCACAAGGTATACTCTGGATGTGAATCTCAAGGATGTGGTCACCGTCGATGCTCTCCAATCCCGTGACAAGAAGATCACGGCTGCCAAAGAGACCAAAAAGAGGTTCGAGGACCGGTTCAAGAGTGGGAAGAACGGGTGGTTCTTCTCTAAGCTCAGGTTTTAA 408 0.4975 MVKFLKPNKAVIVLQGRFAGRKAVIIKNFDDGTRDRLYGHCLVAGISKYPSKVIRKDSAKKTAKKSRVKAFIKLVNYNHLMPTRYTLDVNLKDVVTVDALQSRDKKITAAKETKKRFEDRFKSGKNGWFFSKLRF 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00633 135 Pfam Ribosomal L27e protein family 52 135 IPR001141 GO:0003735|GO:0005840|GO:0006412
Bach13g00633 135 PANTHER 60S RIBOSOMAL PROTEIN L27 1 135 IPR001141 GO:0003735|GO:0005840|GO:0006412
Bach13g00633 135 SUPERFAMILY Translation proteins SH3-like domain 2 135 IPR008991 -
Bach13g00633 135 ProSitePatterns Ribosomal protein L27e signature. 124 135 IPR018262 GO:0003735|GO:0005840|GO:0006412
Bach13g00633 135 FunFam 60S ribosomal protein L27 1 135 - -
Bach13g00633 135 Gene3D - 1 135 IPR038655 -
Bach13g00633 135 CDD KOW_RPL27 6 88 IPR041991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00633 Bach-Chr13 11881077 11881484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00633 1 135 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 80.000 2.53e-78 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00633 K02901 - han:110872403 247.669