Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00620 ATGCTCAGAAGAAGAAAAGTCATCAATTTTTTCTCAAGTCCTAGATTTTCTCAGCTAATTTCTCATGAACTCAATGTAATTCCGCTGCCAATACAATTTCCTTCATACCCTTCTTCCGCACCCCTGAAAAACTTAAACCCTTTTAGGGTTTTGCTCTTCTATGCCTCTTTTTCAAGCCAAGCATCCAAATTTCCAGAATATGAGATGCCCTCTGTGACCTGGGGCGTGATTCAGGGCAGAAAAGAGAAACTCGTTTCGCGGGTAATAATCTTTGACTATCTGAAAGGTTTAGGGATTATTCCTGATGAATTGCAAGACGTGGAAGTGCCTTCTACTGTTGAGGTCATGAGGGAGCGTGTTGAGTTCTTTCAGAAGTTGGGGTTAACCATTGATGATATTAATGAATACCCTTTAATGCTTGGTTGTAGTGTGAGAAAGAATATAATACCTGTGTTGGGGTACTTAGAAAAGATTGGGATTCCAAGGTCAAAACTTGGTGAGTTCATTAAAAATTACCCACAAGTTTTGCATGCAAGTGTTATTGTTGAGCTTGCTCCAGTTGTTAGGTTCCTTAGAGGGCTTGATGTGGAGAAGCAGGATATTGGCTATGTGTTGCAGAAGTATCCTGAACTTCTTGGGTTCAAGCTTGAGGGTACAATGAGTACTTCAGTGGCTTACCTTGTTAGTATTGGTGTCAATCCTAGAGATATTGGTCCGATGGTAACCCAGTATCCTTATCTATTGGGAATGAGAGTTGGGACTGTTATCAAACCACTAATTGATTACTTGGTATCTTTAGGGCTGCCAAAGAAAATTTTATCTAGGATGTTGGAGAAGCGAGCATATATACTTGGGTATGACCTTGAAGAGACTGTTAAACCAAATGCGGATTGTCTGATTAGTTTTGGCATAAGGAGGGAGTTGCTGCCTTCAGTTATTGCTCAATATCCTCAGATTATTGGGCTGCCTCTTAAAGCTAAATTGTCTTCACAGCAGTACTTTTTTAGTTTGAAGCTCAAGATAGATCCTGAAGGGTTTGCACGAGTGGTAGAGAAGATGCCACAGGTAGTTAGCCTTCACCAGCATGTGATAATGAAACCGGCTGACTTCCTATTAGGAAGGGGAATACCATCACATGACGTGGCTAGCATGATGATCAGATGTCCTCAGTTGGTAGCATGTAGAGTTGAGCTCATGAAGAACAGTTATTACTTCTTCAAGAGTGAGATGGGGAGACCCTTAAAAGAGCTTGTGGAGTTCCCAGAATACTTTACTTATAGCTTGGAATCCAGGATCAAACCCAGATACCAGAGGCTACAAAACAAGGGGATAAGGTGTTCATTAAATTGGCTGTTAAATTGTAGTGACCAGAGATTTGAAGAGAGATTGCAGGGTAATTACATTGAAACTGAGAGTATAGGCCCGTCGTTCTGTATGGGTGGGAAGTTAGTGCTATCAGGGGATGAGATGGTGTCAGATGAGGAAGGGGAGAGCGATGATGAAGTACTATACAGACGAATTGTTTCACTTTAG 1533 0.4136 MLRRRKVINFFSSPRFSQLISHELNVIPLPIQFPSYPSSAPLKNLNPFRVLLFYASFSSQASKFPEYEMPSVTWGVIQGRKEKLVSRVIIFDYLKGLGIIPDELQDVEVPSTVEVMRERVEFFQKLGLTIDDINEYPLMLGCSVRKNIIPVLGYLEKIGIPRSKLGEFIKNYPQVLHASVIVELAPVVRFLRGLDVEKQDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVTQYPYLLGMRVGTVIKPLIDYLVSLGLPKKILSRMLEKRAYILGYDLEETVKPNADCLISFGIRRELLPSVIAQYPQIIGLPLKAKLSSQQYFFSLKLKIDPEGFARVVEKMPQVVSLHQHVIMKPADFLLGRGIPSHDVASMMIRCPQLVACRVELMKNSYYFFKSEMGRPLKELVEFPEYFTYSLESRIKPRYQRLQNKGIRCSLNWLLNCSDQRFEERLQGNYIETESIGPSFCMGGKLVLSGDEMVSDEEGESDDEVLYRRIVSL 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00620 510 PANTHER CGI-12 PROTEIN-RELATED 151 283 IPR003690 GO:0003690|GO:0006355
Bach13g00620 510 Gene3D Transcription termination factor 3, mitochondrial 257 470 IPR038538 -
Bach13g00620 510 Gene3D Transcription termination factor 3, mitochondrial 116 256 IPR038538 -
Bach13g00620 510 SMART mt_12 414 445 IPR003690 GO:0003690|GO:0006355
Bach13g00620 510 SMART mt_12 310 342 IPR003690 GO:0003690|GO:0006355
Bach13g00620 510 SMART mt_12 202 233 IPR003690 GO:0003690|GO:0006355
Bach13g00620 510 SMART mt_12 382 413 IPR003690 GO:0003690|GO:0006355
Bach13g00620 510 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Bach13g00620 510 SMART mt_12 274 305 IPR003690 GO:0003690|GO:0006355
Bach13g00620 510 SMART mt_12 238 269 IPR003690 GO:0003690|GO:0006355
Bach13g00620 510 SMART mt_12 347 377 IPR003690 GO:0003690|GO:0006355
Bach13g00620 510 SMART mt_12 166 197 IPR003690 GO:0003690|GO:0006355
Bach13g00620 510 FunFam Transcription termination factor mterf4, chloroplastic 116 253 - -
Bach13g00620 510 Pfam mTERF 152 460 IPR003690 GO:0003690|GO:0006355
Bach13g00620 510 FunFam Transcription termination factor MTERF4, chloroplastic 254 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00620 Bach-Chr13 11743088 11744620 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bach13g00620 mTERF 8.7e-106 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00620 K15031 - qsa:O6P43_029347 855.899