LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach13g00618	ATGAAGATGGTAAAGCCTTCGACAGTGGTGGATTTTGCAGTTGCTGCTGTCTTCGTGTTCAACTTGTTGGTTAACTTAGCGCAAGCTCAACAATCAAACGCTACTACAGATCCTTCTGAAGCTAGAGCTTTGAATTCAATCTTCAACAAATGGGAGATATCAGCATCTAAAGCACAAGAAGTCGGATGGAATATAAGCGCCATCACATGGTATGCTAAGTTTCCTCAAATTGGAATCAGGAATCTGGGCCAGAATTACTTGACAGGTTCTCTACCTCCTGCAATTGGGAACCTTACTGGCATGCAGTACTTGACTTTTGGCATCAATGCCTTATCAGGGGAGCTTCCAAAGGAACTCGGAAATCTTACCGACTTAAGATCATTAAGTTTTTCGTCAAACAGATTCAATGGTTCTCTCCCATCTGAACTTGGTAAACTGGTCAAATTAGAACAACTATATATGGATAGTTCGGGAGTCAGAGGTCCAATTCCTTCAACATTTGCAAATCTGAAAAACCTGGGCATTGTATGGGCTTCAGACGTGGAATTTACAGGCAGGATACCCAACTTTATAGGTTACTGGACTAAGCTGACAGTCTTGAGGTTTCAGGGTAATTCTTTTGAAGGCTCAATACCCTCATCATTTTCCAATTTGACTTCTCTGTCAGAGTTGAGAATAAGTGGCTTATCTAATGGGAGCTCCTCGTTGGAATTGATAAGGAATATGAAGTCTTTGACTATCTTAGAATTGAGGAATAATAATATTTCTGGTTCAATTCCATCCTATATTGGTGAATTTTCAAATTTGACACAGCTGGATTTAAGCTTCAATAATATCGTAGGAGAGATTCCAGGCTTGCTTTTCAACTTGAGTCTGCTTAAATATGTTTTTCTCGGAAATAACACACTTAGCGGTACCCTCCCTACTCAGAAAAGTGCCTCTCTTCAGAATATGGACTTGTCATACAACACCCTGTCAGGGAGCTTCCCTTCTTGGGGGAATCATGTTTCGAAGGATTTTGATATAAAAAAGGAAGCTGGCGGGGCCTCTTATAGAGCTGTCAAAAGAGAATTTAGGGCTTCAGTGTCAGAAAACTATCTTGAGATCCATCTTTTTTGGGCTGGAAAAGGTACTTGCTGTATACCAGATCAAGGTACTTATGGTCCTCTAATTCAAGCTATCAGTGCAATCCCCGATTTCAAACCCACTGTTAGTAATGAACCTCCAACAACCACTAAGAAGGACAGAAACGGTCTCATTGTGGGAATTGCTGTTGGTGTTGGAGTGGTATGCTGTCTGTCTGTTGTCGTAGTTTTGTGTATCGTTCAAAGAAGAAAGCATCAAAGAGATGATGATGAAGAGCTCCTAGGTATTGATACAAAGCCATATACGTTCAGCTATTCTGAGTTAAAGAATGCTACAGATGACTTCAGTATTGACAATAAGCTTGGAGAGGGAGGTTTTGGACCGGTTTATAAGGGGACACTTGATGATGAAAGAGTAATTGCTGTGAAACAACTATCCGCAGGATCCCATCAAGGAAAGAGTCAATTCATAGCTGAGATTGCTACCATATCTGCAGTGCAACATCGTAATCTTGTTAAGTTATATGGATGTTGCATTGAAGGAGATAAAAGACTTCTTGTCTATGAATATCTAGAAAACAAGAGTCTTGATCAAGCATTATTTGGAAATCGTTTAGATCTCAATTGGACTGCACGCTGTGATATTTGCATGGGCATAGCGAGGGGATTAGCATATCTTCATGAGGAGTCACGGCTCCGTATTGTACACCGTGATGTGAAGGCTAGTAATATTTTGCTTGATCATGAGCTTATCCCTAAAATATCTGATTTTGGTTTAGCCAAATTATATGATGATAAGAAGACCCATATAAGCACCCGTGTGGCAGGAACAATTGGATATCTTGCACCGGAGTATGCCATGCGTGGCCATCTTACTGAGAAAGCAGATGTGTTTTCCTATGGCGTTTTGGCTTTAGAGATAATTAGTGGCAGGTCGAATTCTGATTCGAGCTTAGAAGAAGAGAAGGTCTATCTTCTGGAATGGGCTTGGAATCTGTTTGAAAACGAACGTGTAATGGAGCTGGTAGATCCTAGGCTATCAGATTTCAATGAAGAAGTGGTAAAGAGAATTGCAGGGATAGCTCTTTTGTGCACTCAAACATCACCAGCATTACGACCATCAATGTCTCGTGTGGTGGCCATGCTTTCTGGAGATATTGAAGTGAGCCCTGCAACTTCAAGGCCAGTGTACTTTACTGACTGGAAATTTGATGATGTCACCAGCTTAATGACTGACATAGCAACTAAAGGATCAAATACTTACAATTTATCATCAGCAAGTACCAGCGTTATGGGCGGCGTAGAGCTTTCACCCGTGAATCCTTCTAAACCAATTCATGATAGCTCTCTTTGAG	2440	0.4094	MKMVKPSTVVDFAVAAVFVFNLLVNLAQAQQSNATTDPSEARALNSIFNKWEISASKAQEVGWNISAITWYAKFPQIGIRNLGQNYLTGSLPPAIGNLTGMQYLTFGINALSGELPKELGNLTDLRSLSFSSNRFNGSLPSELGKLVKLEQLYMDSSGVRGPIPSTFANLKNLGIVWASDVEFTGRIPNFIGYWTKLTVLRFQGNSFEGSIPSSFSNLTSLSELRISGLSNGSSSLELIRNMKSLTILELRNNNISGSIPSYIGEFSNLTQLDLSFNNIVGEIPGLLFNLSLLKYVFLGNNTLSGTLPTQKSASLQNMDLSYNTLSGSFPSWGNHVSKDFDIKKEAGGASYRAVKREFRASVSENYLEIHLFWAGKGTCCIPDQGTYGPLIQAISAIPDFKPTVSNEPPTTTKKDRNGLIVGIAVGVGVVCCLSVVVVLCIVQRRKHQRDDDEELLGIDTKPYTFSYSELKNATDDFSIDNKLGEGGFGPVYKGTLDDERVIAVKQLSAGSHQGKSQFIAEIATISAVQHRNLVKLYGCCIEGDKRLLVYEYLENKSLDQALFGNRLDLNWTARCDICMGIARGLAYLHEESRLRIVHRDVKASNILLDHELIPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFSYGVLALEIISGRSNSDSSLEEEKVYLLEWAWNLFENERVMELVDPRLSDFNEEVVKRIAGIALLCTQTSPALRPSMSRVVAMLSGDIEVSPATSRPVYFTDWKFDDVTSLMTDIATKGSNTYNLSSASTSVMGGVELSPVNPSKPIHDSSL	812

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach13g00618	812	SUPERFAMILY	L domain-like	22	334	-	-
	Bach13g00618	812	Pfam	Leucine Rich repeats (2 copies)	243	285	IPR025875	-
	Bach13g00618	812	ProSiteProfiles	Leucine-rich repeat profile.	268	290	IPR001611	GO:0005515
	Bach13g00618	812	FunFam	Leucine-rich repeat receptor protein kinase EMS1	71	165	-	-
	Bach13g00618	812	SMART	serkin_6	477	744	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach13g00618	812	Gene3D	Transferase(Phosphotransferase) domain 1	553	754	-	-
	Bach13g00618	812	Pfam	Protein tyrosine and serine/threonine kinase	478	744	IPR001245	GO:0004672\|GO:0006468
	Bach13g00618	812	Gene3D	-	335	398	-	-
	Bach13g00618	812	Gene3D	Ribonuclease Inhibitor	62	334	IPR032675	-
	Bach13g00618	812	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	596	608	IPR008271	GO:0004672\|GO:0006468
	Bach13g00618	812	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	334	770	-	-
	Bach13g00618	812	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	232	344	-	-
	Bach13g00618	812	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	553	756	-	-
	Bach13g00618	812	SUPERFAMILY	Protein kinase-like (PK-like)	459	744	IPR011009	-
	Bach13g00618	812	ProSiteProfiles	Protein kinase domain profile.	477	759	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach13g00618	812	FunFam	Leucine-rich repeat receptor-like protein kinase	446	552	-	-
	Bach13g00618	812	CDD	STKc_IRAK	483	744	-	-
	Bach13g00618	812	Pfam	Malectin domain	333	394	IPR021720	-
	Bach13g00618	812	Gene3D	Phosphorylase Kinase; domain 1	438	552	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach13g00618	Bach-Chr13	11720125	11737471	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach13g00618	333	770	Receptor kinase-like Gene Family	AT1G56120	70.159	0.0	646

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Bach13g00618		PK_Tyr_Ser-Thr	5.4e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach13g00618	-		-	gmx:100798233	751.125