Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00607 ATGGGAAAAGGAAGAAAACCTTGCTGTGATAAGAATCAAGTGAAGAGAGGCCCATGGAGCTCTTCAGAGGATCTGAAGCTCGTAACTTTCATTCAGAAATATGGCCATGATAACTGGAGGGCTCTCCCCAAACTAGCTGGGCTTCAGCGATGTGGGAAAAGTTGTCGTTTGAGATGGATCAACTACCTCAGGCCTGATGTGAAGAGAGGGAATTTTACAGAAGAGGAAGAGGCCACCATCATAAGACTACATGTAGCCTTCGGAAATAAGTGGTCAAAGATTGCATCTCATTTACCTGGTAGGACAGATAATGAGATAAAGAATATTTGGAACACCCATCTGAAGAAAAGATTGCTACCCGAAACTTCAGGATCAAGTGGTGAGGAGTCAAAGCAAGAATCAACAATAACTTCGAATTCCTCTTCACCTTCATCTTCATCAGTTTCCAATGGGACACCAAACACTGCCAATAACAGTGTAACTTCTGAATCAACTGAACATGAAGGCCAAACAGGAAAGCCACAGCCTATGCAGTTTGATTCAGAAAAGCAAGTGTCCATGGAAACCAATGGTGGAATCACTGAGGCAATTAAAGAATCATCAGCTTCAACTCTTTCTCAGGATCCATTAAATATTTCTAACTCAAGCGAGCTCCATATGTACAGACCTGAAGAGCCTGCTCTACTGAATTACATGGGACCTTATGATGTAAACAATACATTAGCTGAGGTAGAAAAGCCAGATGGTGGGTTTGACATACCATTGCTGGCTGATAATGACTTCTGGAACTTCATGGAAAACATAGAATCCCTCAACTCAGAAGAAAGATCAAATCTTGGAGGAGATTACAGTGCTCAAGGAGCTGACAACAATTGGGTTAATTTCCTGTGGAATGACATTGGATTAGAGGCTAAAGAGGAGCAAAACCTGGGTCCCTCTCTCCCAAAAGAGGAACCAGCTGAACCAGCAATGGATTCTAAACCAATTCAGTTTGAGAAAATGGCAAATCCAGAAGGTGATCCAAACATGTTTTATCCTACAACATGTCACTATTGGTCTTGGGCTTGCAATTCTGGGTTTTAG 1083 0.4211 MGKGRKPCCDKNQVKRGPWSSSEDLKLVTFIQKYGHDNWRALPKLAGLQRCGKSCRLRWINYLRPDVKRGNFTEEEEATIIRLHVAFGNKWSKIASHLPGRTDNEIKNIWNTHLKKRLLPETSGSSGEESKQESTITSNSSSPSSSSVSNGTPNTANNSVTSESTEHEGQTGKPQPMQFDSEKQVSMETNGGITEAIKESSASTLSQDPLNISNSSELHMYRPEEPALLNYMGPYDVNNTLAEVEKPDGGFDIPLLADNDFWNFMENIESLNSEERSNLGGDYSAQGADNNWVNFLWNDIGLEAKEEQNLGPSLPKEEPAEPAMDSKPIQFEKMANPEGDPNMFYPTTCHYWSWACNSGF 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00607 360 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Bach13g00607 360 MobiDBLite consensus disorder prediction 118 186 - -
Bach13g00607 360 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 201 - -
Bach13g00607 360 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Bach13g00607 360 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Bach13g00607 360 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Bach13g00607 360 Gene3D - 16 68 - -
Bach13g00607 360 CDD SANT 71 114 IPR001005 -
Bach13g00607 360 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Bach13g00607 360 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Bach13g00607 360 CDD SANT 18 63 IPR001005 -
Bach13g00607 360 SMART sant 68 116 IPR001005 -
Bach13g00607 360 SMART sant 15 65 IPR001005 -
Bach13g00607 360 MobiDBLite consensus disorder prediction 123 186 - -
Bach13g00607 360 FunFam Transcription factor RAX3 9 69 - -
Bach13g00607 360 Gene3D - 71 145 - -
Bach13g00607 360 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00607 Bach-Chr13 11546639 11549407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00607 1 176 MYB Transcription Factor Family AT1G56160 62.360 9.51e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach13g00607 Myb_DNA-binding 5.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00607 K09422 - tcc:18594753 307.375