Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00595 ATGTCGGTGATGATTGTGACGAGTTTGGGAGACATAGTGGTCGATTTGTACACTGAAAAATGCCCCTTAACGAGCAAGAATTTCTTGAAGCTCAGCAAGATTAAGTACTATAATGGATGCCTATTTCACACGGTCCAGAAGGATTTCACTGCTCAAACTGGTGATCCAACGGGAACAGGGGCTGGTGGTGATTCGGTTTACAAATTTCTCTACGGTGATCAAGCTCGCTTTTTTGGTGATGAGATTCATCTTGACTTGAAGCATTCTAAGACTGGTACCATTGCCATGGCTAGTGCTGGAGAAAATCTAAATGCTTCCCAGTTCTATATTACCCTGCGTGATGATCTTGATTATCTTGATGGAAAACATACTGTTTTTGGAGAGGTAGCTGAAGGATTTGAGACTTTGACTAGAATAAATGAGGCTTATGTGGATGAGAATGGGAGACCATATAAAAATATCCGAATCAAGCACATGTACATAATAGATGATCCTTTTGACAATCCTCCTCAGCTAATTGAGTTGATTCCTGATGCTTCTCCAGAAGGAAAGCCAAAAGATGAGGTTGAAGATGATGTGCGGCTTGAAGATGATTGGGTGCCTATGGATGAACAAGTAGACCCCTCAGAGCTTGAAGAGGTTATAAGAGCAAAGGAAGCACATTCTCGGGCAGTTGTTCTTGAGGGTATTGGGGATATTCCTGATGCTGAGATAAAGCCTCCTGATAATGTGCTATTTGTCTGTAAATTGAACCCAGTTACTGAGGATGAAGACTTGCATACAATTTTTTCACGCTTCGGAACTGTATTGTCGGCTGAAATCATCCGTGATTTTAGGACAGGAGACAGTTTATGTTATGCTTTCATCGAGTTTGAGGACCAAATGGCATGTGAACAAGCATATTTTAAGATGGATAACGCTTTGATTGATGATCGAAGGATACACGTGGATTTTAGTCAAAGTGTTGCAAAACTCTGGTCACAATATAGGCGCAATGATCACAAGGGTAAAGGTCGAGGTTGCTTCAAATGTGGTTCTACAGATCATGTTGCCAAGGACTGCACTGCTGATCCCATGATGAAAACACAGTCTACAAAGTTCATGCTGAAAGACAATAATGCCCAACATGGTGGAGACGATAAAAGCTTTGAAATGATTTTTGAAGATAATTCAGAAAGTCCAAGGCGAGAAATGAAACATAGAGGGCATGACAAGCCAAGTTCTAAAGATCATATTCATAGGGGTCGTAGGGATGAAGAAATTATAGGCTCAAGCAAGAGAGATAGGCATGTTGACAGAAACAGACGACAGGGGGAACGACGAGAAAATAAAGCAATTCGATCTGACAGAGGTTCACGGGATATGGATTCCCATGCAGAAAGGAGAGATAGAGAAAAAAATATGGAAAGACAGAGAGATGATGATCGTCGCCGGAAGGATGAGCTAGAATCTAGAAGGACAGATGATGAGTATTTAGAAAGACGGGACAGTGGAGATTATCGGAGAAAACCAGATTCCAGCCAGAGAGAGAGAAGGGATGACAGGGAATACAGGAGAGATGATGGAGAGAGAAGGAAGAGCAGTGCAGCCGATGATAGCCATGGAGACAGGAAAGATGACAGAGAATATAGGAAGAGACATGAAGATAGTAGGAGGAAAGATACAAGGGACGAGTCAAGACGAAGGAAAAGAAGCCCAGATGAAGATGAATGCAGACACCGAAGGGAAGAACAGCGTGAACATAGAAGACGAGATACTGAAGTCAATGATGATAGTCATAGGAGGCATCATTGA 1794 0.4214 MSVMIVTSLGDIVVDLYTEKCPLTSKNFLKLSKIKYYNGCLFHTVQKDFTAQTGDPTGTGAGGDSVYKFLYGDQARFFGDEIHLDLKHSKTGTIAMASAGENLNASQFYITLRDDLDYLDGKHTVFGEVAEGFETLTRINEAYVDENGRPYKNIRIKHMYIIDDPFDNPPQLIELIPDASPEGKPKDEVEDDVRLEDDWVPMDEQVDPSELEEVIRAKEAHSRAVVLEGIGDIPDAEIKPPDNVLFVCKLNPVTEDEDLHTIFSRFGTVLSAEIIRDFRTGDSLCYAFIEFEDQMACEQAYFKMDNALIDDRRIHVDFSQSVAKLWSQYRRNDHKGKGRGCFKCGSTDHVAKDCTADPMMKTQSTKFMLKDNNAQHGGDDKSFEMIFEDNSESPRREMKHRGHDKPSSKDHIHRGRRDEEIIGSSKRDRHVDRNRRQGERRENKAIRSDRGSRDMDSHAERRDREKNMERQRDDDRRRKDELESRRTDDEYLERRDSGDYRRKPDSSQRERRDDREYRRDDGERRKSSAADDSHGDRKDDREYRKRHEDSRRKDTRDESRRRKRSPDEDECRHRREEQREHRRRDTEVNDDSHRRHH 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00595 597 SMART c2hcfinal6 340 356 IPR001878 GO:0003676|GO:0008270
Bach13g00595 597 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 54 IPR002130 GO:0000413|GO:0003755
Bach13g00595 597 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 92 107 IPR002130 GO:0000413|GO:0003755
Bach13g00595 597 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 16 31 IPR002130 GO:0000413|GO:0003755
Bach13g00595 597 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 136 IPR002130 GO:0000413|GO:0003755
Bach13g00595 597 MobiDBLite consensus disorder prediction 391 597 - -
Bach13g00595 597 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 243 321 IPR000504 GO:0003723
Bach13g00595 597 SUPERFAMILY RNA-binding domain, RBD 231 339 IPR035979 GO:0003676
Bach13g00595 597 Gene3D - 324 378 - -
Bach13g00595 597 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 7 161 IPR002130 GO:0000413|GO:0003755
Bach13g00595 597 FunFam Peptidyl-prolyl cis-trans isomerase 182 323 - -
Bach13g00595 597 CDD cyclophilin_RRM 4 169 IPR035538 -
Bach13g00595 597 Gene3D - 1 172 IPR029000 -
Bach13g00595 597 FunFam Peptidyl-prolyl cis-trans isomerase 1 172 - -
Bach13g00595 597 Coils Coil 465 485 - -
Bach13g00595 597 SUPERFAMILY Cyclophilin-like 1 178 IPR029000 -
Bach13g00595 597 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 4 159 IPR002130 GO:0000413|GO:0003755
Bach13g00595 597 CDD RRM_PPIL4 240 322 - -
Bach13g00595 597 Pfam Zinc knuckle 339 355 IPR001878 GO:0003676|GO:0008270
Bach13g00595 597 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 245 315 IPR000504 GO:0003723
Bach13g00595 597 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 4 1 493 IPR035542 -
Bach13g00595 597 Gene3D - 180 323 IPR012677 -
Bach13g00595 597 ProSiteProfiles Zinc finger CCHC-type profile. 341 354 IPR001878 GO:0003676|GO:0008270
Bach13g00595 597 SMART rrm1_1 244 317 IPR000504 GO:0003723
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00595 3 166 U-box Gene Family AT5G67530 37.195 2.03e-27 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00595 K12735 - qsa:O6P43_001226 813.527