Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00573 ATGGGCCATCGGTGCTGCAGCAAACAGAAGATTAAAAGGGGGCTTTGGTCCCCTGAAGAAGATGAGAAGCTTGTCAGACATATCACCACCCATGGTCATAACAGCTGGAGTTCTGTCCCAAAGCTTGCAGGGCTGCAGAGGTGTGGAAAGAGTTGCAGATTGAGATGGATAAACTATTTGAGACCAGACCTCAAGAGGGGATCCTTCACTGCTGAAGAAGAGCAGACCATTATTGATGTTCATAGAATTCTGGGAAACAGATGGTCCCAAATAGCCAAGCATCTCCCAGGAAGGACAGACAACGAGGTCAAGAACTTCTGGAACTCCTGCATTAAGAAGAAACTCATCTCTCACGGGTTAGACCCGCAAACGCACACTCTACTCTCTTCTCATAGGAAAGCCTCTGAATGTAACATCTCAGGAATCCATCCAAACACCAATTCCCTTTTCACTCTGAATTCACTGATACCAAACGCTGACATGGTTCTCAAAGCTCAAGATGATATAATTCAAACTACTTCCCCCATTTTCTCCTCTGAATATCAACCCTCTAGCATTATCTCCGATAATGTTCAAGCTCATGATTCCCCAAATTTCTCAGATTTCCCTCAAGTACCCTCAATTGGGACCACACACAATTTTCGTTCTTCTTCCTGCTGCATGAACCCTTCTGCTGTTGGCTTTTCATCAGGCAATGAGAATTCTAACATTTGGGTTTCGGGTGCTGAAAACTTCAGAGCTCAAACACTTGAAGGAGTGCAAGCACAAGTACAGCAAGCGAGGGAGAAGACTTCTGAGAAGGGAACTGATTATGTCAGAGAATTAGCCAATGGCAATATTCCTGATACGAATGCTTCTTTAGATCATAGCTCTAATTTTGAGTTTGGTTTGTTGGAGAGTTTACTTACTGATGAATTTATGCCTTATGATCTCGGCTCCATGGATGACCTTGCATGGTACTTTTAG 966 0.4379 MGHRCCSKQKIKRGLWSPEEDEKLVRHITTHGHNSWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFTAEEEQTIIDVHRILGNRWSQIAKHLPGRTDNEVKNFWNSCIKKKLISHGLDPQTHTLLSSHRKASECNISGIHPNTNSLFTLNSLIPNADMVLKAQDDIIQTTSPIFSSEYQPSSIISDNVQAHDSPNFSDFPQVPSIGTTHNFRSSSCCMNPSAVGFSSGNENSNIWVSGAENFRAQTLEGVQAQVQQAREKTSEKGTDYVRELANGNIPDTNASLDHSSNFEFGLLESLLTDEFMPYDLGSMDDLAWYF 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00573 321 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Bach13g00573 321 FunFam Transcription factor MYB86 67 146 - -
Bach13g00573 321 CDD SANT 68 108 IPR001005 -
Bach13g00573 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Bach13g00573 321 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Bach13g00573 321 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Bach13g00573 321 SMART sant 65 113 IPR001005 -
Bach13g00573 321 SMART sant 12 62 IPR001005 -
Bach13g00573 321 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Bach13g00573 321 Pfam Myb-like DNA-binding domain 66 109 IPR001005 -
Bach13g00573 321 Gene3D - 10 66 - -
Bach13g00573 321 CDD SANT 16 60 IPR001005 -
Bach13g00573 321 PANTHER MYB DOMAIN PROTEIN 55 1 231 - -
Bach13g00573 321 FunFam MYB transcription factor 5 65 - -
Bach13g00573 321 Gene3D - 68 115 - -
Bach13g00573 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00573 Bach-Chr13 11119452 11120860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00573 1 133 MYB Transcription Factor Family AT3G12720 84.962 2.45e-85 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach13g00573 Myb_DNA-binding 1.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00573 K09422 - gmx:100811532 378.252