Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00572 ATGGCTCCAATGAGTCTCCCACCTGGGTTTAGGTTCCATCCAACAGATGAAGAGCTTGTAGCATATTACTTAGAAAGAAAAATAACAGGACGAACAATAGAGCTTGAAATCATCCCAGAAGTTGATCTGTACAAATGTGAACCTTGGGATTTGCCTGATAAGTCATTTTTGCCAAGCAAAGATATGGAGTGGTACTTCTACAGTCCTAGAGATAGAAAGTATCCAAATGGGTCAAGAACTAATAGGGCAACAAGAGCTGGTTATTGGAAAGCAACTGGGAAAGATAGACAAGTTCATTCTCAAAAGCGACCGGTTGGCATGAAGAAGACATTGGTTTATTACAGAGGTAGAGCCCCACATGGGATTAGAACCAACTGGGTCATGCATGAGTATCGTCTCCTCGAATCTGTACCTGCCACTGCTTCTTCCTCTTTGAAGGATTCCTATTCCTTGTGTCGCGTTTTCAAGAAGACAATACAAACAATCTCCAAACCTAAAGAAGAAGAAGAAACTGAGAATGCCAAGAAGGAATCTATGTGGATCTCAGGAGAACAAGCACAAGGAGAAGACTCAAGTGGCATTGAGATTTCTAGAGAAAGAGAAATGCCAGATGAGAAAGTGTTAAATCATATTGATCCTCCTAAATTTCCATGTGATGCTTCTTCTTCAGATGTCACTCAAGGAACACCAACAGAAACAGCTGGTGTAGCAGATGATTGTCAAGTACAGTTTGCTTCAGATGAAGCAAACAGCGCATCAAATTCATATTCTCTTGGTGTGGATTATTACCCGTCAAATCTATTTCAGGATATGGAGCTACCGATCTATGCAGGCTTGCATTATCAACTTTCATACCCTCCTTTGGAGCTGGAAGATTTCCCTCAAATACACTTATCAGAGACAAAATTGATGAAGCAAGAAACAACTGAGGAATGCATGTTATATGACAAATACCGGGACTGCATGAATGGAACACTAGAAGAGATCTTCTCTTTGTGTTCCTCTCAGGATAATTCTGTGGCCTTGTCCATGCTAGATTGA 1041 0.4092 MAPMSLPPGFRFHPTDEELVAYYLERKITGRTIELEIIPEVDLYKCEPWDLPDKSFLPSKDMEWYFYSPRDRKYPNGSRTNRATRAGYWKATGKDRQVHSQKRPVGMKKTLVYYRGRAPHGIRTNWVMHEYRLLESVPATASSSLKDSYSLCRVFKKTIQTISKPKEEEETENAKKESMWISGEQAQGEDSSGIEISREREMPDEKVLNHIDPPKFPCDASSSDVTQGTPTETAGVADDCQVQFASDEANSASNSYSLGVDYYPSNLFQDMELPIYAGLHYQLSYPPLELEDFPQIHLSETKLMKQETTEECMLYDKYRDCMNGTLEEIFSLCSSQDNSVALSMLD 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00572 346 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Bach13g00572 346 MobiDBLite consensus disorder prediction 178 192 - -
Bach13g00572 346 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Bach13g00572 346 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Bach13g00572 346 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 224 - -
Bach13g00572 346 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Bach13g00572 346 FunFam Nac domain-containing protein 86 15 160 - -
Bach13g00572 346 MobiDBLite consensus disorder prediction 163 177 - -
Bach13g00572 346 MobiDBLite consensus disorder prediction 163 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00572 Bach-Chr13 11111923 11115357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00572 1 331 NAC Transcription Factor Family AT1G54330 55.120 2.72e-106 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bach13g00572 NAM 1.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00572 - - gmx:100808325 558.14