Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00569 ATGGGAAACATATTTGCTAAAAAGCGTGACCGTCAATTTTCCAGAAATGTTAAAGTTAGGGATAGCCTCTCAGGAAGAGCGTCTTCCAACTTAACCAGAAGAACGGTGTCAAATCCACGGTCAGCGGAAACGCTACCGCCACCTCCGCCGCAGCCGCAGCCGCAGCCGCAGCCTCAGCCTCAGCCTCGCCCGGTGGAACCGATGTCTACTTCAGGACTGAAGCACATCACGGAGAGAAAGTTATCTGCTAAGAAAAAATATGCTCTCATTCCGGATAACTTCTCTTCCCTTGACCAGGTTACTGCAGCCTTGAGGAAAGAAGGCTTAGAATCATCCAATCTAATCGTTGGTATTGATTTCACAAAGAGCAATGAATGGACTGGAAAAATCTCATTCAACAAGAGAAGCCTGCACGCCATTGGTGATACGCCTAACCCCTATGAGAAGGCCCTCGCCATCATTGGCAAGACTATGGCTCCCTTTGATGATGACAACTTGATTCCTTGCTTTGGATTTGGTGATGCTACAACTCATGATCAAGAAGTGTTTAGCTTTCACAGTGATCATACTCCCTGCCATGGCTTTGAGGAAGTTCTGGCTTGCTACCAAAAAATAGTTCCAAACTTGAAACTTTCAGGGCCAACATCTTATGCTCCCGTTATCGAGGCTGCAATAGACATAGTTGAGAAACATCACGGCCAATTCCATGTCTTGCTTATAGTTGCAGATGGCCAGGTTACAAGAAGTGTTAACACTGATGATGGAGAACTCAGCCCTCAAGAACAGAAAACTATACAAGCAATTGTTGAAGCAAGTTCCTACCCGCTTTCGATTGTTCTTGTTGGAGTTGGTGATGGACCTTGGGATGACATGAAAAAGTTTGATGACAAGATACCGGCACGTGATTTTGACAACTTTCAGTTTGTAAACTTTACTGAGATAATGTCTAAAGATACAAGCCCTGCCCAGAAAGAAGCAGCTTTTGCCCTGGCTGCTCTTATGGAGATACCCTTCCAATATAAAGCAGCAGTTGAACTTGGACTACTTGGACACGTAACGGGGCGGGCGAAGAAAATAGTTCCAAAGCCTCCTCCAGTTCCTTATTCTCGCCTTGTCACACCTGCTCGTGCACTAAGCAATAATATGTCAGCATCCGCAGATGATGAACGAACCCAAATGGTTTGTCCAATTTGCCTAACCAATTCGAAGGAATTGGCTTTTCAATGTGGGCACATGACTTGCAGAGATTGTGGATCAAGGATAACCAGCTGCCCCATATGCAGAGAGAGGATCACAAATCGTCTGAGAGTGTTCACTGGCTAA 1323 0.4558 MGNIFAKKRDRQFSRNVKVRDSLSGRASSNLTRRTVSNPRSAETLPPPPPQPQPQPQPQPQPRPVEPMSTSGLKHITERKLSAKKKYALIPDNFSSLDQVTAALRKEGLESSNLIVGIDFTKSNEWTGKISFNKRSLHAIGDTPNPYEKALAIIGKTMAPFDDDNLIPCFGFGDATTHDQEVFSFHSDHTPCHGFEEVLACYQKIVPNLKLSGPTSYAPVIEAAIDIVEKHHGQFHVLLIVADGQVTRSVNTDDGELSPQEQKTIQAIVEASSYPLSIVLVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKDTSPAQKEAAFALAALMEIPFQYKAAVELGLLGHVTGRAKKIVPKPPPVPYSRLVTPARALSNNMSASADDERTQMVCPICLTNSKELAFQCGHMTCRDCGSRITSCPICRERITNRLRVFTG 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00569 440 ProSiteProfiles Zinc finger RING-type profile. 395 428 IPR001841 -
Bach13g00569 440 MobiDBLite consensus disorder prediction 42 65 - -
Bach13g00569 440 SUPERFAMILY RING/U-box 388 434 - -
Bach13g00569 440 PANTHER COPINE FAMILY PROTEIN 1 50 416 - -
Bach13g00569 440 Pfam Copine 136 349 IPR010734 -
Bach13g00569 440 MobiDBLite consensus disorder prediction 18 41 - -
Bach13g00569 440 SUPERFAMILY vWA-like 112 294 IPR036465 -
Bach13g00569 440 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 377 440 IPR013083 -
Bach13g00569 440 MobiDBLite consensus disorder prediction 1 71 - -
Bach13g00569 440 Pfam Zinc finger, C3HC4 type (RING finger) 393 432 - -
Bach13g00569 440 SMART VWA_4 111 314 IPR002035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00569 Bach-Chr13 11080730 11087939 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00569 K16280 - gmx:100795579 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g00569 13 11080730 11087939 Bach13g00569 13 11080730 11087939 ECH