Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00562 ATGTTTTGGCTGAATGTGGCGGGACTCAACCTTTCTGATTCGTCACTCACCGGATCAATATCTCCCTCACTCGGGCGTTTGGAGAACCTGCTCCACCTTGATCTCTCTTCTAGTGCCCTCTCAGGTCCCATTCCACCTACTCTTTCTGACCTTACTGCTTTGGAATCTCTTCTTTTCTCTAACCAACTCACTGGCCGTATCCCCACTGAGTTAGGCTTGCTCACGAGTCTCCGAGTCCTTCGAATCGGTGATAACGAACTCACGGGAACCATTCCTGCGTCACTTGGGAATTTGGTTAATCTGGTTAACCTTGGTTTGGCATCCTGCAGTCTCACCGGTCTGATTCCACCACAACTGGGGAGACTTGGCAAAATGGAGAACCTTGTTTTACAAGAAAATGAGCTCATCGGTATTTACATAAACAACCTTGGTAAAACATGGAAGAAGCTTCAACTTGCTGCCTGGGTTATTGTTGGCATTGAAATCCCTCAGGATATTGTTAAGTCTGCCAGGCATAATGGTCAGAGAGCGGTTCTCAAATTTGCCCAGTACACTGGTGCCTATGCAATTGCTGGAAGACACACTCCTGGTACATTCACCAATCAGCCCCAGACATCATATGGTGAGCCTCACCTTCTCATTTTGACTGATCCAAGAACGGACCACCAGGTTAATACCTCTTGA 684 0.4737 MFWLNVAGLNLSDSSLTGSISPSLGRLENLLHLDLSSSALSGPIPPTLSDLTALESLLFSNQLTGRIPTELGLLTSLRVLRIGDNELTGTIPASLGNLVNLVNLGLASCSLTGLIPPQLGRLGKMENLVLQENELIGIYINNLGKTWKKLQLAAWVIVGIEIPQDIVKSARHNGQRAVLKFAQYTGAYAIAGRHTPGTFTNQPQTSYGEPHLLILTDPRTDHQVNTS 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00562 227 PRINTS Ribosomal protein S2 signature 210 227 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach13g00562 227 PRINTS Ribosomal protein S2 signature 185 202 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach13g00562 227 PRINTS Ribosomal protein S2 signature 137 146 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach13g00562 227 SUPERFAMILY Ribosomal protein S2 137 224 IPR023591 -
Bach13g00562 227 Gene3D - 122 227 - -
Bach13g00562 227 CDD RPS2 137 224 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach13g00562 227 SUPERFAMILY L domain-like 5 149 - -
Bach13g00562 227 Gene3D Ribonuclease Inhibitor 59 121 IPR032675 -
Bach13g00562 227 Gene3D Ribonuclease Inhibitor 4 58 IPR032675 -
Bach13g00562 227 PANTHER 40S RIBOSOMAL PROTEIN SA 125 224 IPR005707 GO:0003735|GO:0006412|GO:0015935
Bach13g00562 227 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 56 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00562 Bach-Chr13 10959953 10961223 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00562 102 223 Cytoplasmic Ribosomal Protein Gene Family AT1G72370 65.041 1.87e-43 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00562 - - gmx:100801889 191.045