Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00561 ATGCCGTGGTTTGTTGCTTCGCGGGGGAAGACGTCGCTGCTGGGCGTGCACCTGGTTGCGCCTTGGAACGGTAAAGTCTGCTGGCTGAAAGGCGGGACACGGCGGTGGAGCAGTGGCAACGATGGCGGAGCGAAAGCTCGCGGAGGTATGCGCCTGGTTGCGGGTTGGGTTGTGCATCTGGGCTCGTCGGCGTCTGGTGCTGCTGTGGAGATCAAGCGGGTTTGGGGTGACGATGAAGGCCGGAGGACGCCTGCGTCTGGCGTGGTGGTGGACGCTGGGGAGCTGAGGTCGCTGATTGGAAGAGGATCAAGTCAGCTGCTGTCGTGGTTGCGTCTGGTTGGGTCCGCCTGGTCTGTGGATCACGGATGGACTCGGCTCTGGTTGCTGGCGACGTCTGGACTGGTGCGCTCTGGTTCGGTGTGCGGATGGAGCGGTGGCACGCGGGTGATGGTGGTCGCTGCTGTTGCTTTACTCTCGTGTCTCTCTGTTCCTTCTTTCTTGTGTCACTCCGTTCCTTCACTCTGGCATGGCCCCGGAATTGATTATAAACTAGTGTCAGCTAGTGGTATTTATATAAACAACCTTTGTAAAGCATGGGAAAAGCTTCAACTTGCTGCCAGGGTTATTGTTGCCATTGAAATCCCTCAGGCTATTGTTAAGTCTGCCAGGCATTATGGTCAGAGAGCAGTTCTCAAGTTTGCCCAGTACACTGGTGCTCTTGCAATCGCTAGAAGACACACTCCTGGTACATTCACCAATCAGCTACAAACATCATATGGCGAGCCTCACCTTCTCATTTTGACTGATCCAAGAACGGATCACCAGGAAGCTGCTCTTGGAAATATACCAACCATTACTTTCTGTGACACTGCTTCTCCAATGCGTTATATTGACATCGGCATTCCTGCCAATAATAAGGGGAGGCATAGCATCGGTTGTCTCTTATAG 948 0.5401 MPWFVASRGKTSLLGVHLVAPWNGKVCWLKGGTRRWSSGNDGGAKARGGMRLVAGWVVHLGSSASGAAVEIKRVWGDDEGRRTPASGVVVDAGELRSLIGRGSSQLLSWLRLVGSAWSVDHGWTRLWLLATSGLVRSGSVCGWSGGTRVMVVAAVALLSCLSVPSFLCHSVPSLWHGPGIDYKLVSASGIYINNLCKAWEKLQLAARVIVAIEIPQAIVKSARHYGQRAVLKFAQYTGALAIARRHTPGTFTNQLQTSYGEPHLLILTDPRTDHQEAALGNIPTITFCDTASPMRYIDIGIPANNKGRHSIGCLL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00561 315 PRINTS Ribosomal protein S2 signature 189 198 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach13g00561 315 PRINTS Ribosomal protein S2 signature 276 287 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach13g00561 315 PRINTS Ribosomal protein S2 signature 297 311 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach13g00561 315 PRINTS Ribosomal protein S2 signature 237 254 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach13g00561 315 Gene3D - 182 315 - -
Bach13g00561 315 SUPERFAMILY Ribosomal protein S2 187 314 IPR023591 -
Bach13g00561 315 CDD RPS2 189 315 IPR001865 GO:0003735|GO:0005840|GO:0006412
Bach13g00561 315 PANTHER 40S RIBOSOMAL PROTEIN SA 187 314 IPR005707 GO:0003735|GO:0006412|GO:0015935
Bach13g00561 315 Pfam Ribosomal protein S2 260 312 IPR001865 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00561 Bach-Chr13 10951854 10955432 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00561 188 315 Cytoplasmic Ribosomal Protein Gene Family AT1G72370 79.545 4.63e-68 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00561 K02998 - jre:109004976 211.46