Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00556 ATGATAGTTCATATTACTCACAGTTGTCCCAAGTCTGCAACTAATTCACCAAATCGTTCCAAACAGGTCAATCAATTTGCAAAAAATGCTGTGAATACAACTGACAGTTCATCAAGTGAAACTGGAGAAATGAAAACTGATTCTAAGTTGTCAAGTGATGCAGCATCGGAACATAAACTAGAGCTACCTACCAAGCCTACTGATTTCGCTACTAATCAACGCTCAAGTCCAGGTGCAAGGGTGCTTCAGAGTTCTGATCCCTCAACAAGGACCACAAATCATGGCCAAGGGAGTGGAAATAGCTCTCGTAGTGACAGTTTAGAGAGCACCAGCAGTGCACCCATTAGGCCACATACTGGTGGTGATGTGAGGTGGGATGCTTTTAACATGGTTTCCAAGGGCGGCCCTCTTAATCTTAGCCATTTTCGGCTTCTCAAGCGTCTTGGATATGGAGATATTGGAAGTGTATATCTTGTGGAACTTAGAGGAACTAGGACCTACTTTGCCATGAAAGTAATGGACAAGGCATCTCTTGTAAGCAGAAATAAGCTGCTACGAGCACAAACAGAAAGGGAGATTCTTGGACTTCTTGACCACCCATTCTTACCCACTTTGTATTCTTACTTTGAAACTGATAAGTTCTACTGTTTGGTCATGGAGTTCTGTAGTGGTGGTAATCTTCATTCTCTTCGACAGAAGCAACCTAACAAGCATTTTACTGAAGAAGCCGCAAGGTTTTATGCTTCAGAGATATTGTTAGCTCTTGAATACCTGCATATGCTAGGAATTGTATACAGAGACTTGAAGCCAGAGAATGTATTGGTGAGAGATGAAGGGCATATCATGCTCTCAGATTTTGACTTATCACTCCGCTGCTCGGTCAATCCTACACTTGTCAAGTCATCATCTGCCCATGCAAGCAATATAAGCAGTAATGGGGCCATTTTGAATGATGAGAATGCAGTACAAAGTTGTATCCAGCCATCAACATTTTTCCCACGCATTTTACCTTCAAAGAAGAACCGTAAATCAAAATCAGATTTTGGCCTTCTGGTTGGAGGAGATCCCCTCCCTGAACTGATGGCAGAGCCCACCAATGTGCGCTCAATGTCATTTGTGGGCACACATGAATATCTTGCTCCAGAGATTATCCGGGGAGAGGGCCATGGCAGTGCAGTAGATTGGTGGACATTCGGTATCTTCTTGTACGAGCTGTTACATGGTACAACTCCATTCAAGGGTGCAGGAAACAGGGCCACACTGTTTAATGTTGTAGGTCAGCCATTGAGGTTCCCAGAAGCTCCCCAGGTCAGCAATGCATCGCGGGATCTTATAAAAGGATTGTTGGTGAAGGAACCACACAAGAGAATTGCTTATAAAAGAGGTGCAGCAGAAATAAAAAGACACCCTTTTTTTGAAGGAGTGAACTGGGCTCTTGTAAGAAGTGCAACACCTCCCATTATACCAGATGCTGTAGATTTTTCACAATATGCCAGCAAAGATACGGCACCCCCAGCAGCAGAGAAGAAGATGACAGATATTGCAAATGATAAAAACAACAGTAGTCACACTGATTCTTCTAACGTAGATTTTGAGTATTTTTAG 1605 0.4305 MIVHITHSCPKSATNSPNRSKQVNQFAKNAVNTTDSSSSETGEMKTDSKLSSDAASEHKLELPTKPTDFATNQRSSPGARVLQSSDPSTRTTNHGQGSGNSSRSDSLESTSSAPIRPHTGGDVRWDAFNMVSKGGPLNLSHFRLLKRLGYGDIGSVYLVELRGTRTYFAMKVMDKASLVSRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPNKHFTEEAARFYASEILLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVNPTLVKSSSAHASNISSNGAILNDENAVQSCIQPSTFFPRILPSKKNRKSKSDFGLLVGGDPLPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGAGNRATLFNVVGQPLRFPEAPQVSNASRDLIKGLLVKEPHKRIAYKRGAAEIKRHPFFEGVNWALVRSATPPIIPDAVDFSQYASKDTAPPAAEKKMTDIANDKNNSSHTDSSNVDFEYF 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00556 534 Gene3D Transferase(Phosphotransferase) domain 1 226 300 - -
Bach13g00556 534 SMART serkin_6 142 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00556 534 FunFam Serine/threonine-protein kinase AGC1-5 140 225 - -
Bach13g00556 534 MobiDBLite consensus disorder prediction 517 534 - -
Bach13g00556 534 Gene3D Transferase(Phosphotransferase) domain 1 367 490 - -
Bach13g00556 534 MobiDBLite consensus disorder prediction 8 45 - -
Bach13g00556 534 FunFam Serine/threonine-protein kinase AGC1-7 365 490 - -
Bach13g00556 534 CDD STKc_phototropin_like 140 493 - -
Bach13g00556 534 Pfam Protein kinase domain 143 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00556 534 Pfam Protein kinase domain 366 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00556 534 FunFam serine/threonine-protein kinase D6PK-like 226 293 - -
Bach13g00556 534 MobiDBLite consensus disorder prediction 1 119 - -
Bach13g00556 534 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Bach13g00556 534 ProSiteProfiles Protein kinase domain profile. 142 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00556 534 PANTHER FLIPPASE KINASE 1-RELATED 24 498 - -
Bach13g00556 534 MobiDBLite consensus disorder prediction 503 534 - -
Bach13g00556 534 Gene3D Phosphorylase Kinase; domain 1 140 225 - -
Bach13g00556 534 MobiDBLite consensus disorder prediction 46 64 - -
Bach13g00556 534 MobiDBLite consensus disorder prediction 66 116 - -
Bach13g00556 534 SUPERFAMILY Protein kinase-like (PK-like) 139 500 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00556 Bach-Chr13 10855509 10857486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00556 107 534 AGC Kinase Gene Family AT1G79250 75.391 0.0 680
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bach13g00556 Pkinase 3.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00556 - - gmx:100784301 781.941