Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00552 ATGCCAAATCTCCACGGCCACAGCCCTACGTATGGTAGTGGAGCAGCATCACCGCCTTCTGCTCCCACTGTCCTTACTACTTCTTCTCTCTATCTCCGCACCACGCGCTGTCTTCCCTCCGAGACACGCGCCACCACCGACATGTACCCACACCTTAGTGACGTTCTTCGGTATTCCTCTTACGCCACGGCGGCGGACATTGACATTGGCCCGCCTGGTGTAGGTTCCAAAATCTCCGGTGCTGTTGAACCCGCCTCTTCCTCCACCTCACATTTGCTATCTCAAGCTAATTGGCCAGCAGCCATAGTCGCTGCTGCTAATGGTGGTTCTTCTGCACTCGACGCCGTTGTTGCCGGCATCAAACGCTCTACCGAAGTGCTCTACCATCCAACCGTTTTGGGTACCCATAACACAATTGGGCAAAGTGAAGCTTGGTATTCTACAAACTCATTAACCAAGCGCCCTAGATACGAGAATGCAAGCAATTTGCCTATATATCCACAGAGGCCAGGAGAGAAGGACTGTGCCCACTATATGCTCACAAGAACCTGTAAATTTGGAGATAGCTGCAAGTTTGACCATCCTATTTGGGTTCCTGAGGGTGGAATCCCAAATTGGAAAGAGGTTCTACCTGTTGTTACCAGTGATTCTCTTCCTGAGAGACCAGGTGAACCAGATTGTCCATACTTTCTAAAAACTCAGAGATGCAAGTTTGGTTCAAGATGCAGGTTTAATCATCCAAAGGATAATTTTGCCAGTGTGGGTTCCTATGAAAGTGGAGATGTTTCTGCCTTGCCTGAGAGGCCATCTGAGCCTCCGTGTGCGTTCTACATGAAAACAGGAATATGTAAGTTTGGTTCTGTCTGCAAATTCCATCACCCAAAAGATATTGTGGTTCAGTTGTCTGGACAGCCAAACGGTACTGGAGAACAGACGCAGTTCACTACAATGATGGAGGGAGCTGCTGGAGATGCAAAACCATTTAGTCCTTTTATTTCATACACTCCTCCACTAGCACATAATAGCAAAGGACTTCCTGTAAGACTGGGTGAAGTGGATTGTCCATTCTACATGAAAACTGGCAGTTGCAAGTATGGTGCTACTTGCCGCTACAATCATCCTGATAGGAGTGTAATTAATCCGCTTGTGGCTGCATTAGGCCATTCTGTCTTGACACCCTCCTCAGCTAATCTTAGTATTGGGGTTGTTAATCCAGCTGCATCTTTATATCAAGCTATTGATCCCAGACTGTCAAATTCAATGGTGGGAATGGGGCAAACTATCTATCCTCAACGACCTGGACAAATTGAGTGCGATTACTATATGAAGACCGGGGAGTGTAAATTTGGGGAAAGATGCATGTACCATCACCCAATTGATCGATCAGTTAAACTCACACTTGCAGGATTACCTAGAAGAGAGGGTGCTGTCATCTGTCCGTATTATTTAAAAACCAGCACGTGTAAGTTTGGCGTGACCTGCAAGTTTGATCACCCACCTCCCGGAGAAGTTATGCAGATGGCAAAGTCGCAAGGAATACCTATGACTACGGGAGAGGAGGTGAAGGACATAGGAAAAGGGCTTGAATCTGTTGGGGAACAGCATTGA 1608 0.4714 MPNLHGHSPTYGSGAASPPSAPTVLTTSSLYLRTTRCLPSETRATTDMYPHLSDVLRYSSYATAADIDIGPPGVGSKISGAVEPASSSTSHLLSQANWPAAIVAAANGGSSALDAVVAGIKRSTEVLYHPTVLGTHNTIGQSEAWYSTNSLTKRPRYENASNLPIYPQRPGEKDCAHYMLTRTCKFGDSCKFDHPIWVPEGGIPNWKEVLPVVTSDSLPERPGEPDCPYFLKTQRCKFGSRCRFNHPKDNFASVGSYESGDVSALPERPSEPPCAFYMKTGICKFGSVCKFHHPKDIVVQLSGQPNGTGEQTQFTTMMEGAAGDAKPFSPFISYTPPLAHNSKGLPVRLGEVDCPFYMKTGSCKYGATCRYNHPDRSVINPLVAALGHSVLTPSSANLSIGVVNPAASLYQAIDPRLSNSMVGMGQTIYPQRPGQIECDYYMKTGECKFGERCMYHHPIDRSVKLTLAGLPRREGAVICPYYLKTSTCKFGVTCKFDHPPPGEVMQMAKSQGIPMTTGEEVKDIGKGLESVGEQH 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00552 535 Gene3D - 217 306 - -
Bach13g00552 535 Gene3D - 430 512 - -
Bach13g00552 535 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 351 374 IPR000571 GO:0046872
Bach13g00552 535 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 271 295 IPR000571 GO:0046872
Bach13g00552 535 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 223 248 IPR000571 GO:0046872
Bach13g00552 535 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 477 500 IPR000571 GO:0046872
Bach13g00552 535 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 435 458 IPR000571 GO:0046872
Bach13g00552 535 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 171 195 IPR000571 GO:0046872
Bach13g00552 535 ProSiteProfiles Zinc finger C3H1-type profile. 473 501 IPR000571 GO:0046872
Bach13g00552 535 PANTHER PROTEIN PHOSPHATASE RELATED 335 387 - -
Bach13g00552 535 MobiDBLite consensus disorder prediction 1 22 - -
Bach13g00552 535 SUPERFAMILY CCCH zinc finger 352 375 IPR036855 GO:0046872
Bach13g00552 535 SUPERFAMILY CCCH zinc finger 477 500 IPR036855 GO:0046872
Bach13g00552 535 FunFam zinc finger CCCH domain-containing protein 37 430 514 - -
Bach13g00552 535 Gene3D - 342 383 - -
Bach13g00552 535 Gene3D - 131 208 - -
Bach13g00552 535 SUPERFAMILY CCCH zinc finger 434 460 IPR036855 GO:0046872
Bach13g00552 535 ProSiteProfiles Zinc finger C3H1-type profile. 221 249 IPR000571 GO:0046872
Bach13g00552 535 SUPERFAMILY CCCH zinc finger 170 196 IPR036855 GO:0046872
Bach13g00552 535 SMART c3hfinal6 221 248 IPR000571 GO:0046872
Bach13g00552 535 SMART c3hfinal6 268 295 IPR000571 GO:0046872
Bach13g00552 535 SMART c3hfinal6 473 500 IPR000571 GO:0046872
Bach13g00552 535 SMART c3hfinal6 432 459 IPR000571 GO:0046872
Bach13g00552 535 SMART c3hfinal6 169 196 IPR000571 GO:0046872
Bach13g00552 535 SMART c3hfinal6 348 375 IPR000571 GO:0046872
Bach13g00552 535 FunFam Zinc finger CCCH domain-containing protein 37 334 381 - -
Bach13g00552 535 ProSiteProfiles Zinc finger C3H1-type profile. 432 460 IPR000571 GO:0046872
Bach13g00552 535 ProSiteProfiles Zinc finger C3H1-type profile. 348 376 IPR000571 GO:0046872
Bach13g00552 535 FunFam Zinc finger CCCH domain-containing protein 37 125 206 - -
Bach13g00552 535 ProSiteProfiles Zinc finger C3H1-type profile. 169 197 IPR000571 GO:0046872
Bach13g00552 535 ProSiteProfiles Zinc finger C3H1-type profile. 268 296 IPR000571 GO:0046872
Bach13g00552 535 SUPERFAMILY CCCH zinc finger 226 250 IPR036855 GO:0046872
Bach13g00552 535 SUPERFAMILY CCCH zinc finger 272 296 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00552 Bach-Chr13 10833107 10841193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00552 212 519 C2H2 Transcription Factor Family AT3G02830 31.176 5.37e-40 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach13g00552 zf-CCCH 1.2e-08 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00552 - - pcin:129313610 739.184