Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00538 ATGAGTGTAGCAATGACTATATCTTCAACCTCGTCATCCCCTTCTACTGTCCTCTATCCTCATCGCCACACCCACTTCCTCGAACTCATGGACTCCCCTCTCTTCTCTCAATCCGACATAGACCCATCATCTTCTCCTTCCCTCTTTGAAACCCCCCATCTCCATCGCCTACTCCGAGAACACCTCATTCCTGCCAACGAGTTCGACGTCGACGACTTTGGTGAAACCGAAGATGAAGTTGAAGACCCATTACCTTTGATCTCCTCTCAAAACTCTCTCTGCATCTCCAAATTTCGCACTTATTCAATACCCACGATTTTGGTTACCTCTTCCTTGCTAGCTGAGCTGGACCCAAGTGGTGTTCTTTGTGCTGTTTGCAAGGACCCAATTTGTGTCGATGTAGAAGCAAAGCAGCTTCCCTGTAAACATTTATACCACTCTGATTGCATTGTCCCGTGGCTGGCACACCACAATTCGTGCCCACTTTGCCGGTTTCAGCTTGCTACAGAAGAAGAGGAAGGGGCTGCTCGGGCAAGGAGGATTAGGACGCAATTGAGAACGGCCATGATGAGGCTTTGA 579 0.4888 MSVAMTISSTSSSPSTVLYPHRHTHFLELMDSPLFSQSDIDPSSSPSLFETPHLHRLLREHLIPANEFDVDDFGETEDEVEDPLPLISSQNSLCISKFRTYSIPTILVTSSLLAELDPSGVLCAVCKDPICVDVEAKQLPCKHLYHSDCIVPWLAHHNSCPLCRFQLATEEEEGAARARRIRTQLRTAMMRL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00538 192 ProSiteProfiles Zinc finger RING-type profile. 123 164 IPR001841 -
Bach13g00538 192 SUPERFAMILY RING/U-box 113 168 - -
Bach13g00538 192 SMART ring_2 123 163 IPR001841 -
Bach13g00538 192 Pfam Ring finger domain 123 164 IPR001841 -
Bach13g00538 192 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 112 180 IPR013083 -
Bach13g00538 192 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 49 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00538 Bach-Chr13 10718278 10718856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00538 40 182 C3H Transcription Factor Family AT3G60080 41.830 6.61e-24 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00538 K11982 - qsa:O6P43_029465 187.193