Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00530 ATGGAGCTTGATTTGAATCAAGAGCCTTTGGACCAAACTCTTACTCCAGCAAGGGGATTTGATTCTGTATTGAATGAAATAGAATCAGCGCATGAACATATAGTAGAACGTATTAGACACCTTGAAGCTGTAACCTATAGAGCTAGGCAGCGTCAGAGGTGGCGGCAGGGTCGCAATCACACTCCTGTTGAGATAAGTACTAGCAACGCAGGAGGATTAGCAACAGCTAGTGTTCAAGATGAAGACACGGTGCACCAGGGAGAAGGTGGTAATGCTGTTCAGGAAAGGGCAGTTGATAGTGGGAAAACGGCCAAAACGAGCAGTGCCTATTTAGTGGCTAGAGCATTGGAGATGGATACAGACAGGGAGACCAAAAAGGCTGAGAGCAGCAACAATGGGGGCTTTTTTGATTGTAATATATGCTTGGACATGGCAAGAGACCCTATTTTGACATGCTGTGGTCATTTGTTTTGTTGGCCATGCTTCTATCAGTTGTCACATTTCTGTTCAAGTGCAAGGGAATGCCCTGTTTGTAGAGGAGAGGTCACTGAATCAGGAATTATTCCAATTTATGGCAATGCTAGTGTCTCTAGCAGCCATAAGTTAGAACTGAAAGAAGCAGGTTTCAGGATACCACCTAGGCCCACTGCACGTAGAATTGAGAGTTTCAGGCAGCAACTCATAAGCCGGAGAGCATCTTCTTCTGCAATCCAGGAAAGGATCCAGCGGTTTAGTAACCTGATTGGTGGAATAGGAGAGCGAGTTCAGTCAGTAAGCCTTGAACCTGCTGATGATAGAACTCACCTTTTGGCCAATCAATATCGCCCTTCCCCATCACTGGCTTTATCCAGCATGGAAAGAGAGAATAATCAGCATCCTCGTTCCCAGCAACTTTCAAGATTGTTAATGCAAGGAGTTGCTTCCTTTTCATCCCTTTCGTCAGCACTAAACTCAGCTATGGATTCCGCAGAAAGATTAGTTGAGGACCTGGAAACATATATTCATAATCACAATTCAGGAGGAAGCCGACAGCCAAATCCAGGTGTTGTTAATAGGGATTCACCTATAAGCATTGTTGCTACAACCCAAGCAGCGAGTAACACTCCAGATGTTGTTGCTGCAACCAATTCAGTAGCCGTTACTTCTGTTTCTCCTTTAAGTAGGAATGATGCTGCTACTGCTATTATAGGCTTAGAAATTCAAACAGATAGTGCTGTAGAGATTAGTCCAATGTACCCTTCTTCCTCATCTTCCCGTAGAACTGATGTTTTAAGACTTCCAGACTCTGACAATCAAAACGGGATTTCAAATGAACCCAGAAGGAGAAGGCTAAGGTGA 1338 0.4425 MELDLNQEPLDQTLTPARGFDSVLNEIESAHEHIVERIRHLEAVTYRARQRQRWRQGRNHTPVEISTSNAGGLATASVQDEDTVHQGEGGNAVQERAVDSGKTAKTSSAYLVARALEMDTDRETKKAESSNNGGFFDCNICLDMARDPILTCCGHLFCWPCFYQLSHFCSSARECPVCRGEVTESGIIPIYGNASVSSSHKLELKEAGFRIPPRPTARRIESFRQQLISRRASSSAIQERIQRFSNLIGGIGERVQSVSLEPADDRTHLLANQYRPSPSLALSSMERENNQHPRSQQLSRLLMQGVASFSSLSSALNSAMDSAERLVEDLETYIHNHNSGGSRQPNPGVVNRDSPISIVATTQAASNTPDVVAATNSVAVTSVSPLSRNDAATAIIGLEIQTDSAVEISPMYPSSSSSRRTDVLRLPDSDNQNGISNEPRRRRLR 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00530 445 ProSiteProfiles Zinc finger RING-type profile. 138 179 IPR001841 -
Bach13g00530 445 MobiDBLite consensus disorder prediction 409 434 - -
Bach13g00530 445 MobiDBLite consensus disorder prediction 409 445 - -
Bach13g00530 445 SMART ring_2 138 178 IPR001841 -
Bach13g00530 445 SUPERFAMILY RING/U-box 137 185 - -
Bach13g00530 445 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 110 238 IPR013083 -
Bach13g00530 445 Pfam Zinc finger, C3HC4 type (RING finger) 138 184 - -
Bach13g00530 445 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 105 296 IPR045103 GO:0005783|GO:0006511|GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00530 Bach-Chr13 10651704 10653041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00530 84 420 C3H Transcription Factor Family AT3G58030 33.244 3.82e-39 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00530 - - qsa:O6P43_029476 423.32