LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach13g00515	AAAATGTGGAGATTTAAGCCATTCATGCATAAAGAACCAGCTGGGCTTGAAGGCCGTATTATAGATGTTGGCAATCTTAAAATAAATGTCCAGAAAGCCATTGCTGAAGGGGGTTTCTCTTCTGTCTACTTAGTTCGTGATGCTGTACATCTGTCAAAGCAATATGCTTTGAAGCACATGATATGCAATGATGAAGAATCACTTGAATTGGTTAAGAAGGAGATCTCAGTGATGAAGTCACTAAGAGGGCATCCCAATATTGTTACACTTTATGCACATACAATCTTTGATATGGGTAGGACAAAAGAGGCATTTCTTGTGATGGAATTTTGTGAAAAATCTTTGGTTAATGTGCTGGAGAGCCGAGGAGCTGGATATTTTGATGAAAGTCAGGCTCTTTTAATCTTCAGGGATTTATGTAATGCAGTTTTCGCTATGCACTGTCAATCCCCACCAATTGCTCACAGAGACTTGAAAGCTGAGAATCTTTTATTAAGTTCAGATGGCCTGTGGAAGTTGTGTGATTTTGGAAGTACTTCCACCAATCATAAACGTTTTGAGAAGCCAGAAGAAATGGGGATTGAAGAAGACATTATCAGGAAGTACACAACACCTGCCTACAGGGCCCCTGAGATGTGGGATCTCTTCCTGAGAGAACTCATTAACGAGAAAGTGGATATATGGGCGCTTGGGTGTCTTCTTTTTCGCATATGCTACTTCAAAAGTGCTTTCGATGGAGAATCGAAGCTGCAGGTCTTAAATGGAAACTATCGGATTCCAGATTTACCTAAATACAGCTCATCTGTTACAGACTTAATCAGAGACATGCTTCAAGCTAAACCAGATGACAGACCAGATATCACGCAGGTCTGGTTTCGTGTTAATGAGCAACTACCTAGTAATTTGCAGAAGTCCTTACCTGATAGACCACCTGAATTGGCTTCTTCCAACAATCATGAAGGAGCTTCAAAGCCTGCTCCTCGCAGGGCTGCACCTCCCCCACCTTCACCTGGAGAGCCTAAAAATACATCACCATCCCATGCTTCTAAGGGAGGGGGAACTGGAGGCCAGCTTGGTGCTTTCTGGTCCACTCTGCATGCTAAGGACTCACTTGTCCCTGAGAAGTGCAAACCCATATTTGGTGAAGAATCATCTAGCAATCATAGTTCATCAAAACATGATAGGACTCATCCAGATAATAATCAATTACCCAAAAGTGTTAGTACTAACAAAAAGGATATGGATCATGGTAATGAGAGGCGATCGTCATCAAGTATGGAGAACAAAGCTGCTTTTCAAGACCAGGCTTTTAACACGTTTGTTACTGAGTTTGATACCAATAAGCTTAACTCTGGGTTCAGTAACAAAAAATCTGATGAAAGGGAAGAAGCATTGGAGGCTGAGGTGGAAAAACTCAAAGAGAAGCTTAAGGGAGTTAACATGGAGAAAGCTGAAATAACTTCTAAGTATGAGAAGCTTTCTGCCATTTGCCGATCTCAGAGGCAGGAGATACAGGATCTCAAGCAAGCACTCGCAGCAAGAACTCCATCACCAAATAGAGAGGGTTTGAGAACCTCTACTGGATTTCCATCACCTGCAGCTATGAGGGAGAAGCTTGGTGGGACAGTTGGAGAACACCAGCAAGCTAGAACTCCTAATTCAGAACCGAGGTCTTGGCAAGCTTTTCCCGAGGAACCACAGCCACAGAAGCCCCTTTCGGCAGACAATAGTACCAAATCTGTTAGGACTAGAAATGGTCAGCAGAAGAAGCCTGCTCCACGAACGTCTGATTTCGATACTTGGGGTTTCGGAACAGATAGCTTTACTGCTGTAAGTTCTGGCAGTCCACAGATGCCAAGACCTTCTACTGAAGGGAGCAATTCTCAGGTTTTAGGTGAGACAAAGACCTTTGAGAGCAGCTCAACTTCTCAACCTGCAGGATGGGCTGGTTTTTAA	1956	0.432	MWRFKPFMHKEPAGLEGRIIDVGNLKINVQKAIAEGGFSSVYLVRDAVHLSKQYALKHMICNDEESLELVKKEISVMKSLRGHPNIVTLYAHTIFDMGRTKEAFLVMEFCEKSLVNVLESRGAGYFDESQALLIFRDLCNAVFAMHCQSPPIAHRDLKAENLLLSSDGLWKLCDFGSTSTNHKRFEKPEEMGIEEDIIRKYTTPAYRAPEMWDLFLRELINEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDLPKYSSSVTDLIRDMLQAKPDDRPDITQVWFRVNEQLPSNLQKSLPDRPPELASSNNHEGASKPAPRRAAPPPPSPGEPKNTSPSHASKGGGTGGQLGAFWSTLHAKDSLVPEKCKPIFGEESSSNHSSSKHDRTHPDNNQLPKSVSTNKKDMDHGNERRSSSSMENKAAFQDQAFNTFVTEFDTNKLNSGFSNKKSDEREEALEAEVEKLKEKLKGVNMEKAEITSKYEKLSAICRSQRQEIQDLKQALAARTPSPNREGLRTSTGFPSPAAMREKLGGTVGEHQQARTPNSEPRSWQAFPEEPQPQKPLSADNSTKSVRTRNGQQKKPAPRTSDFDTWGFGTDSFTAVSSGSPQMPRPSTEGSNSQVLGETKTFESSSTSQPAGWAGF	650

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach13g00515	650	MobiDBLite	consensus disorder prediction	569	650	-	-
	Bach13g00515	650	MobiDBLite	consensus disorder prediction	376	430	-	-
	Bach13g00515	650	FunFam	probable serine/threonine-protein kinase DDB_G0280111	10	305	-	-
	Bach13g00515	650	ProSiteProfiles	Protein kinase domain profile.	27	297	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach13g00515	650	MobiDBLite	consensus disorder prediction	408	422	-	-
	Bach13g00515	650	MobiDBLite	consensus disorder prediction	300	321	-	-
	Bach13g00515	650	SMART	serkin_6	27	291	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach13g00515	650	Gene3D	Transferase(Phosphotransferase) domain 1	11	306	-	-
	Bach13g00515	650	MobiDBLite	consensus disorder prediction	545	559	-	-
	Bach13g00515	650	MobiDBLite	consensus disorder prediction	508	650	-	-
	Bach13g00515	650	MobiDBLite	consensus disorder prediction	300	359	-	-
	Bach13g00515	650	SUPERFAMILY	Protein kinase-like (PK-like)	28	333	IPR011009	-
	Bach13g00515	650	Coils	Coil	454	509	-	-
	Bach13g00515	650	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	152	164	IPR008271	GO:0004672\|GO:0006468
	Bach13g00515	650	PANTHER	SERINE/THREONINE PROTEIN KINASE	1	633	-	-
	Bach13g00515	650	CDD	STKc_GAK_like	26	298	-	-
	Bach13g00515	650	MobiDBLite	consensus disorder prediction	326	340	-	-
	Bach13g00515	650	Pfam	Protein kinase domain	29	289	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach13g00515	Bach-Chr13	10462509	10465678	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach13g00515	26	292	Miscellaneous Gene Families	AT2G34180	29.537	6.79e-22	97.8

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	NAK	Bach13g00515		Pkinase	4.6e-41	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach13g00515	K08853		-	qsa:O6P43_001313	930.628