Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00511 CAGCAATGGCGCCGGCAAAGCAAAGAGCACCCAGGGTTAGTAGGAACCCTGAGCTTATTCGAGGGATTGGGAAGTACTCCCGATCAAAGATGTACCACAAGAGGGGTCTCTGGGCCATCAAGGCCAAGAACGGCGGCAAATTCCCTCACCATGATCCCAAGCCTAAGCCTGAAGCGCCGGTTGAGAAGGCCCCCAAGTTTTACCCAGCCGATGATGTCAAGAAGCCCCTAATCAATAAGCGCAAGCCAAAACCGACCAAGCTCAGGCCTAGCATTACTCCTGGGACTGTTCTAATTCTCCTTGCTGGAAGATTCAAAGGAAAGAGAGTGGTGTTTCTGAAGCAGCTTTCTTCAGGCTTGCTTCTTGTCACTGGTCCATTCAAGATTAATGGAGTTCCATTGAGAAGGGTCAACCAATCTTATGTCATCGGCACATCCACCAAGGTTGACATATCTGGTGTGAATGTGGATACATTTGACGACAAGTATTTTGCAAAGGAAGTTCAGAAAAAGAAAACAAAGAGTGAAGGCGAGTTCTTTGAGGCAGAGAAGGAGGAGAAGAATGTGCTCCCACAGGAGAAAAAAGACGACCAGAAAACTGTTGACGCAGCTTTGATTAAGGCCATTGAGAGTGTTCCAGAATTGAAGGCATATTTGGGTGCCAGATTTTCCCTCAAGGCTGGCATGAAGCCCCACGAGCTAGTCTTCTAG 710 0.4817 MAPAKQRAPRVSRNPELIRGIGKYSRSKMYHKRGLWAIKAKNGGKFPHHDPKPKPEAPVEKAPKFYPADDVKKPLINKRKPKPTKLRPSITPGTVLILLAGRFKGKRVVFLKQLSSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDTFDDKYFAKEVQKKKTKSEGEFFEAEKEEKNVLPQEKKDDQKTVDAALIKAIESVPELKAYLGARFSLKAGMKPHELVF 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00511 234 FunFam 60S ribosomal protein L6 88 172 - -
Bach13g00511 234 MobiDBLite consensus disorder prediction 43 64 - -
Bach13g00511 234 Gene3D - 88 173 IPR014722 -
Bach13g00511 234 PANTHER 60S RIBOSOMAL PROTEIN L6 7 234 IPR000915 GO:0003735|GO:0005840|GO:0006412
Bach13g00511 234 MobiDBLite consensus disorder prediction 41 64 - -
Bach13g00511 234 Pfam Ribosomal protein L6, N-terminal domain 4 61 IPR005568 GO:0003735|GO:0005840|GO:0006412
Bach13g00511 234 Pfam Ribosomal protein L6e 127 234 IPR000915 GO:0003735|GO:0005840|GO:0006412
Bach13g00511 234 CDD KOW_RPL6 82 234 IPR041997 -
Bach13g00511 234 SUPERFAMILY Translation proteins SH3-like domain 87 174 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00511 Bach-Chr13 10431963 10433543 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00511 3 234 Cytoplasmic Ribosomal Protein Gene Family AT1G74050 83.190 1.56e-126 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00511 K02934 - rcu:8261126 398.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g00511 13 10431963 10433543 Bach13g00511 13 10431963 10433543 ECH