Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00503 ATGGCGCCGGCAAAGCAAAGAGCACCCAAGGTGAGGAACCCTGAGCTCATTCGTGGGATTGGAAAGTACTCCCGATCAAAAATGTACCACAAGAGGGGTCTCTGGGCCATCAAAGCCAAGAACGGTGGCAAATTCCCTCACCATGACCCCAAGTCTAAGCCTGAAGCGCCGGTTGAGAAGACTCCCAAGTTCTACCCAGCTGATGATGTCAAGAAGCCCCTCATCAACAAGCGAAAGCCAAAACCGACCAAGCTCAGGCCAAGCATTACTCCTGGGACTGTTCTGATTCTTCTTGCTGGAAGATTCAAGGGAAAGAGAGTGGTGTTTCTCAAGCAGCTTTCTTCTGGCTTGCTTCTTGTTACTGGTCCTTTCAAGATTAATGGAGTTCCATTGAGAAGGGTCAATCAGTCTTATGTCATTGGAACATCCACCAAGGTTGACATATCTGGTGTTAATGTGGAAAAATTTGATGACAAGTACTTCGCAAAGGAAGTTCAAAAAAAGAAAACGAAGGGAGAAGGCGAGTTCTTTGAGGCGGAGAAGGAGGAGAAGAATGTGCTCCCACAGGAGAAAAAAGATGACCAGAAAACTGTTGATGCTGCTTTGATTAAGGCCATTGAGAGTGTTCCAGACTTGAAGACATATTTGGGTGCAAGGTTTTCTCTCAAGGCTGGCATGAAGCCCCATGAGCTAGTTTTCTAGATTTTAGGCTTGTTTTTCATATTGTTTTTTGGTTGAGCTGTAATAGACAATCTTAAAAGATATGATTTTATGTTAGCAATGCCCCTTTCAAGGATTTTTCTTAAATTTTGGTCCAGTGTATGACATATTTCATGAGATAAATTTGTTAGCTATTATGTT 861 0.4321 MAPAKQRAPKVRNPELIRGIGKYSRSKMYHKRGLWAIKAKNGGKFPHHDPKSKPEAPVEKTPKFYPADDVKKPLINKRKPKPTKLRPSITPGTVLILLAGRFKGKRVVFLKQLSSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVEKFDDKYFAKEVQKKKTKGEGEFFEAEKEEKNVLPQEKKDDQKTVDAALIKAIESVPDLKTYLGARFSLKAGMKPHELVF 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00503 233 MobiDBLite consensus disorder prediction 40 63 - -
Bach13g00503 233 CDD KOW_RPL6 81 233 IPR041997 -
Bach13g00503 233 FunFam 60S ribosomal protein L6 87 171 - -
Bach13g00503 233 Pfam Ribosomal protein L6, N-terminal domain 3 60 IPR005568 GO:0003735|GO:0005840|GO:0006412
Bach13g00503 233 Gene3D - 87 171 IPR014722 -
Bach13g00503 233 Pfam Ribosomal protein L6e 126 233 IPR000915 GO:0003735|GO:0005840|GO:0006412
Bach13g00503 233 SUPERFAMILY Translation proteins SH3-like domain 86 173 IPR008991 -
Bach13g00503 233 MobiDBLite consensus disorder prediction 42 63 - -
Bach13g00503 233 PANTHER 60S RIBOSOMAL PROTEIN L6 7 233 IPR000915 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00503 Bach-Chr13 10338934 10340778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00503 3 233 Cytoplasmic Ribosomal Protein Gene Family AT1G74050 84.052 1.20e-125 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00503 K02934 - thj:104826663 396.741