Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00498 TTTTGCTCTTCATGCTTTTTACCCATTGAAACTTCTATGATTTGGTTATGCGGTAGCTGATCAAGGAGAAAATTTTATCAAACTTAACCATCAGAACAAGAAGATCGTTTTTTCCCGATTAAATCAAATTGAGCGAAGACAACTATCAGTGAGTTGCTGTAAACTGCATTATTACATTTGGCCATTTAGCTAATGGACAACGGAGTGGCTCCTACCCTTTTTGTTAATGATGGTTCATTCATGGAGAGATTCAAGCAACTGCAACAAGAGCAGGAGAAGGAGAAGGCTTCCAAAGTAGAGGAGTCTAAATCAACTAAAATTGTTTCAGGGTCTTTGATTCCTAATCCTTCCATTGGTAAAGCCGCTGTGGACTTTAAGGTTAGTAATGCTGGGAAAACTCTCCAGGCTGGTTCTAGTGGCAAACTTGCTTTTAGCATAAAACAAAAGTCAAAGCTAGTGCCACCACCTGTTAAGTTAACTGGTGATGAGGACGAAGAAGAAACAGATGCTGGTGATGTTTCAAGTGATGCACCATCAAAGCGGCAAAAGTTGGGTCAGAATGATGTCACTGAGCAATCATTGGGACCACTTGATGTTGCACCTTTGTCCCCAAGTGATCCTACAGTGAAGAAAGTTGCTGACAAACTAGCAAGTTTTGTGGCTAAAACTGGAAGGCAATTTGAGGATGTTACACGTCAAAAAAATCCTGGGGATACACCTTTCAAATTTTTATTTGATGAAAAATGTGCTGACTACAAATATTATGAGTATCGGCTTGCTCAGGAGGAAAAGGCGCTTGCTCAGTCCAGAGAACCACAGATATCCCGTGGTGGCGGTACAAGCACCTCATCTTCCAGATCAACATATACTCCTCAGAGATCTTCTCAGCAGCATTCAACTTACCAAATTCCTGCATCCGCTTTATATGAAAGTGCTGATGTTCCAAGAGCTTCTGGATCTGTAGGAAGTACTGACGAGCCTGGTGCATCATCAAATGCTGATTCTTTAGCGCTAATGGAGTTCTACATGAAGAAAGCTGCACATGAAGAGAGGAAGAGACAACCTAAGCATTCAAAAGATGAGATGCCCCCTCCTCCTTCTCTTCAAGCCTCTGGGAAAAAAGGTCATCACATGGGTGATTACATTCCCCCAGAAGAACTTGATAAGTTCTTGGCTACCTGTAATGACGTAGCGGCACAGAAAGCTGCCAAGGAGGCTGCTGAGAAGGCTAAAATTCAGGCTGATAACGTTGGCCACAAGCTCTTGTCAAAAATGGGTTGGAAAGAAGGTGAGGGTCTTGGTAGCTCCAGGAAGGGTATTTCAGATCCAATCATGGCAGGTAACGTCAAGATGAATAACTTGGGGGTTGGTGCTGAAAATCCTGGGGAGGTGACTCCAGAAGATGACATATATGAGCAGTACAAAAAGCGGATGATGCTTGGTTATCGTTACAGACCCAATCCTCTGAATAACCCTCGCAAGGCTTATTACTGA 1494 0.429 MDNGVAPTLFVNDGSFMERFKQLQQEQEKEKASKVEESKSTKIVSGSLIPNPSIGKAAVDFKVSNAGKTLQAGSSGKLAFSIKQKSKLVPPPVKLTGDEDEEETDAGDVSSDAPSKRQKLGQNDVTEQSLGPLDVAPLSPSDPTVKKVADKLASFVAKTGRQFEDVTRQKNPGDTPFKFLFDEKCADYKYYEYRLAQEEKALAQSREPQISRGGGTSTSSSRSTYTPQRSSQQHSTYQIPASALYESADVPRASGSVGSTDEPGASSNADSLALMEFYMKKAAHEERKRQPKHSKDEMPPPPSLQASGKKGHHMGDYIPPEELDKFLATCNDVAAQKAAKEAAEKAKIQADNVGHKLLSKMGWKEGEGLGSSRKGISDPIMAGNVKMNNLGVGAENPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00498 433 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 307 433 IPR040169 -
Bach13g00498 433 ProSiteProfiles SURP motif repeat profile. 148 191 IPR000061 GO:0003723|GO:0006396
Bach13g00498 433 MobiDBLite consensus disorder prediction 22 49 - -
Bach13g00498 433 Coils Coil 17 37 - -
Bach13g00498 433 ProSiteProfiles G-patch domain profile. 350 397 IPR000467 GO:0003676
Bach13g00498 433 MobiDBLite consensus disorder prediction 209 237 - -
Bach13g00498 433 MobiDBLite consensus disorder prediction 201 237 - -
Bach13g00498 433 MobiDBLite consensus disorder prediction 89 144 - -
Bach13g00498 433 MobiDBLite consensus disorder prediction 22 38 - -
Bach13g00498 433 Pfam G-patch domain 351 395 IPR000467 GO:0003676
Bach13g00498 433 SMART surpneu2 146 200 IPR000061 GO:0003723|GO:0006396
Bach13g00498 433 SUPERFAMILY Surp module (SWAP domain) 131 199 IPR035967 GO:0003723|GO:0006396
Bach13g00498 433 MobiDBLite consensus disorder prediction 283 316 - -
Bach13g00498 433 Pfam Surp module 147 197 IPR000061 GO:0003723|GO:0006396
Bach13g00498 433 SMART G-patch_5 348 395 IPR000467 GO:0003676
Bach13g00498 433 MobiDBLite consensus disorder prediction 115 129 - -
Bach13g00498 433 Gene3D Surp module 97 204 IPR035967 GO:0003723|GO:0006396
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00498 Bach-Chr13 10274324 10279043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00498 339 406 C2H2 Transcription Factor Family AT5G26610 40.580 1.81e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00498 K13096 - gmx:100786213 629.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g00498 13 10274324 10279043 Bach13g00498 13 10274324 10279043 ECH