Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00486 ATGACAGACCCTTCTAAGTCCCATTTATTCACTGGATGCCTCAACTTCATGCCCATCCAACACCCTCAGCACTACTCCTCTTTCACTTCACAATCCTTCCTGTCCTCTTCTTACCCTCTTGCTTATTCAAACAATAGATATTCCATTCAATTCCCAACCTTCAGTTCCTCTAATCCTCCTCCTCCTTCATCTCCTCCTCTCAGAGAAGCTCTTCCTCTTATAAACAACTTAAGCTTCAGCACAAACCAGGGAAAGGTTAAAGAGCCCTCAAAAAGTAAAGAGGAATCAGAGGACAATAAGAACATGAACAACGAGGATGAAGATGATGATGAAACTGTGACTGTAGCACTGTCCATAGGGCCTCCTAGTAAGAATTCTGATCAGGGTTCAAGGCAGATCTCGTCATCAACTTCAGCAGAAATGACTGAAAAAGAGGAAATGACTGTGGTTTCTGGACACCCTTTGGAGAGATTGAACAAGGGTCAATATTGGATTCCAACCCCTTCTCAGATTCTCATTGGCCCTACTCAGTTCTCATGCCCTCTGTGCTCCAAAACTTTCAACAGATACAATAATCTTCAGATGCATATGTGGGGACATGGATCTCAATACAGAAAAGGACCTGATTCTTTAAGGGGAACTCAAACAACAGCCATGTTAAGGCTTCCATGCTTTTGCTGTGCACCAGGTTGCAAGCACAACATTTACCATCCAAGAGCAAGGCCTCTCAAAGACTTCAGAACCCTTCAAACACATTACAAGAGAAAGCATGGAATCAAACCCTACTTGTGCAGAAAATGCGGCAAAGCATCTGCAGTGAAAGGAGACTGGAGAACGCATGAGAAGAACTGTGGCAAAATATGGTACTGCCTTTGTGGGTCTGATTTCAAACACAAGAGGTCCTTAAAAGACCACGTTAAGGCTTTTGGCCATGGCCATGGAGCTTTTGGCATTGATTGCTCGCAAGAAGATGATGAAGTAGTAGAAGCAGAAGCAGCCTTCGAGATTGAACATGATGGGGAGAACTCAATCTGA 1035 0.4377 MTDPSKSHLFTGCLNFMPIQHPQHYSSFTSQSFLSSSYPLAYSNNRYSIQFPTFSSSNPPPPSSPPLREALPLINNLSFSTNQGKVKEPSKSKEESEDNKNMNNEDEDDDETVTVALSIGPPSKNSDQGSRQISSSTSAEMTEKEEMTVVSGHPLERLNKGQYWIPTPSQILIGPTQFSCPLCSKTFNRYNNLQMHMWGHGSQYRKGPDSLRGTQTTAMLRLPCFCCAPGCKHNIYHPRARPLKDFRTLQTHYKRKHGIKPYLCRKCGKASAVKGDWRTHEKNCGKIWYCLCGSDFKHKRSLKDHVKAFGHGHGAFGIDCSQEDDEVVEAEAAFEIEHDGENSI 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00486 344 ProSitePatterns Zinc finger C2H2 type domain signature. 180 200 IPR013087 -
Bach13g00486 344 SUPERFAMILY beta-beta-alpha zinc fingers 247 282 IPR036236 -
Bach13g00486 344 Gene3D Classic Zinc Finger 177 200 - -
Bach13g00486 344 MobiDBLite consensus disorder prediction 118 144 - -
Bach13g00486 344 SMART c2h2final6 262 282 IPR013087 -
Bach13g00486 344 SMART c2h2final6 288 311 IPR013087 -
Bach13g00486 344 SMART c2h2final6 178 200 IPR013087 -
Bach13g00486 344 MobiDBLite consensus disorder prediction 78 153 - -
Bach13g00486 344 FunFam Zinc finger protein WIP2 231 313 - -
Bach13g00486 344 SUPERFAMILY beta-beta-alpha zinc fingers 172 200 IPR036236 -
Bach13g00486 344 ProSiteProfiles Zinc finger C2H2 type domain profile. 178 205 IPR013087 -
Bach13g00486 344 Gene3D Classic Zinc Finger 260 335 - -
Bach13g00486 344 FunFam zinc finger protein WIP2-like 177 200 - -
Bach13g00486 344 PANTHER ZINC FINGER PROTEIN WIP2 35 331 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00486 Bach-Chr13 10150926 10152803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00486 139 343 C2H2 Transcription Factor Family AT3G57670 73.171 2.28e-115 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach13g00486 None None None