Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00481 ATGAGGAAATCTGATTTGGTGGGGAAAGATCAAAAAATGAACAATACCAACAGCAACAACAATATTAAGAGCAAGCTAAGGAAAGGGTTATGGTCACCTGAGGAAGATGAGAAGCTCATTAGGTACATGTTGACTAATGGACAAGGGTGTTGGAGTGACATTGCCAGGAATGCTGGCCTCCAAAGATGTGGCAAAAGTTGTCGGCTTCGTTGGATTAATTACTTGAGACCTGACCTCAAACGCGGTGCCTTTTCACCACAGGAGGAAGAGCTCATCATTCATTTGCACTCCATTCTTGGCAACAGATGGTCTCAGATTGCAGCACGGCTACCTGGAAGGACAGACAATGAGATTAAGAATTTCTGGAATTCAACATTGAAGAAAAGGATTAAAAACAACAATGCTTCCACAACATCACCAAACAACAGTGGTTCATTAGATCCTACTAGAGATGTTTTGGGTGGGATCATGCCTATTAATGAACATGACCTCATGACCATGTGCATGGATTCCTCTTCATCATCTTCATCTTCATGCATGCAATCCATGCAAGCCATGGTTTTTGCTGATCAATTCGATCCGTTTTCAATGTTGAATAATCGCTATGGCATGGCCAATGCAGCCAGTTTCAATGATATTTCTACATGCTTAACCCAAGCTGGCATGGTTGATGGGCTTTATGGTGATTATGGGATGTTAGAGGCTAATAAGATGGGGTTAGAAAGAGACCTCTCGTTTCCGCCCCTAGAAAGTAGAAGCATTGAAGACAATAGTGCTCCAATTGATGTGAAAAGCCATAACAACGACTTCAATAATAGTTGCTTCAATAACACTGATCAGATTCAGAATCACAACTCTAAAGTAGAGGACTTGTTTGGGTTGGGAAATCATGGGCAAGGAGAAAACTTAAGAATGGGAGAATGGGATTTGGAGGGTCTGATGCAGGATATATCCTCTTTCCCTTTCCTTGATTTCCAAGTTGAATAA 987 0.4154 MRKSDLVGKDQKMNNTNSNNNIKSKLRKGLWSPEEDEKLIRYMLTNGQGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIIHLHSILGNRWSQIAARLPGRTDNEIKNFWNSTLKKRIKNNNASTTSPNNSGSLDPTRDVLGGIMPINEHDLMTMCMDSSSSSSSSCMQSMQAMVFADQFDPFSMLNNRYGMANAASFNDISTCLTQAGMVDGLYGDYGMLEANKMGLERDLSFPPLESRSIEDNSAPIDVKSHNNDFNNSCFNNTDQIQNHNSKVEDLFGLGNHGQGENLRMGEWDLEGLMQDISSFPFLDFQVE 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00481 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 75 IPR017930 -
Bach13g00481 328 FunFam MYB transcription factor 25 81 - -
Bach13g00481 328 MobiDBLite consensus disorder prediction 1 27 - -
Bach13g00481 328 SMART sant 80 128 IPR001005 -
Bach13g00481 328 SMART sant 27 77 IPR001005 -
Bach13g00481 328 MobiDBLite consensus disorder prediction 10 26 - -
Bach13g00481 328 CDD SANT 83 126 IPR001005 -
Bach13g00481 328 ProSiteProfiles Myb-like domain profile. 76 126 IPR001005 -
Bach13g00481 328 ProSiteProfiles Myb-like domain profile. 23 75 IPR001005 -
Bach13g00481 328 Pfam Myb-like DNA-binding domain 81 125 IPR001005 -
Bach13g00481 328 Pfam Myb-like DNA-binding domain 28 75 IPR001005 -
Bach13g00481 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 130 IPR017930 -
Bach13g00481 328 Gene3D - 25 81 - -
Bach13g00481 328 FunFam Transcription factor MYB46 82 151 - -
Bach13g00481 328 Gene3D - 82 147 - -
Bach13g00481 328 PANTHER MYB DOMAIN PROTEIN 55 21 288 - -
Bach13g00481 328 CDD SANT 31 75 IPR001005 -
Bach13g00481 328 SUPERFAMILY Homeodomain-like 26 122 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00481 Bach-Chr13 10082991 10084911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00481 1 328 MYB Transcription Factor Family AT3G08500 50.279 7.75e-87 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach13g00481 Myb_DNA-binding 4.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00481 K09422 - gmx:100784755 462.996