Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00478 ATGGTGGGATGGGAAGGGAAGAGTAGGATCAGTGAGGTCTTTTTGTACTTTGCTGCTCATGTGGCTGAGAAATCAAAATCTCCTTCAACTCCATCTTCATCTGCTATAGAAAACAAAACTAAAGCCGAAGATATGAAACAGCTGACTGTTCATACAGAAGATTCTTTTTCCAGTTTACTGGAACTTGCTTCTAACAATGATATTGAAGGCTTTAAGCAGGTATTAGATAGGGATGCTTCTTCAATAAATGAAGTTGGGCTCTGGTATGGCCGCCAAAATGGATCCAAACAAATTGTTCTTGAGCACAGAACTCCATTAATGGTTGCTGCTACCTATGGCAGTATCAATGTTCTGAAGCTTATACTCTTGAATCCAGAGGCTGATGTAAATTTATCCCATGGGATGGATAAGAGCACTGCCCTTCACTGTGCTGCTTCTGGTGGATCTCCGAATGCAGTTGATGCCGCGAAGCTTCTTTTATCAGCTGGTGCTGATCTTAATTGTGTAGATGCTAATGGAAATCGTCCTGTTGATGTTATTGTTTTCCCTCCCAAGCTGCCAGGCATGCGAGCAACTCTAGAGGAGCTTCTTTCATATAATTCTTCTGATGGATCTGTCAGTGACTCTGTTGCAATGTCCGTTAATTCATTGAGTCCTGATTCAGCTGCTCATTTATCATCTTCTGATAATGGGATGCCATCCTCTCCTTCGGGTTCACCATCCTCTCCAGCAGCTTCGAAGTTTACTGATATGCTTGTTGGTTGTACAATTGAGAAGAAAGAGTATCCAATTGATCCATCACTTCCTGATATAAAAAATAGCATTTATGCAACAGATGAGTTTCGCATGTTCTCATTCAAGGTCCGTCCGTGTTCCCGGGCATACTCTCATGATTGGACTGAGTGTCCTTTTGTTCATCCAGGAGAGAATGCTCGCAGGAGAGATCCCAGAAAGTTCCATTACAGCTGTGTGCCATGCCCTGACTTCCGTAAGGGGGCTTGTAGACGTGGGGATATGTGTGAATATGCTCATGGAATATTTGAATGCTGGCTACACCCAGCTCAGTATCGGACACGGCTATGCAAAGATGGTACGAACTGCAATAGGAGGGTGTGTTTCTTTGCTCACACTGCTGAAGAGCTTCGTCCACTATATGTGTCCACTGGATCTGCAGTCCTTTCACCACGTTCATCTGCCTCTGCTAATGTGATGGACATGGCTGCTGCATTGAATCTTTTGCCAGGTTCACCTTCATCAGTCTCCTCCATGTCTCCATCCCCATTTGCTCAGCCGATATCCCCATCTGCAAATGGCATTTCACATTCATCTGTGCCTTGGCCACAGCCAAACGTCCCAGTCCTTCATCTACCAGGAAGCAGTTTTCAATCTAGTCGCTTGAAATCTTCCCTTAGTGCTCGAGATATTCCCCCTGAAGACTGGAATGTATTGCCAGATTTTGATGGCCAGCAACACCTTTTGAATGACTTGAGCTGTTTCTCACAGCCCCATCCTGGTGCTGCCTTGGTGAGTCGACCTGGTCTGTCCATGACACTAACCCCATCAAATCTTGAAGAGCTCTTTTCTGCTGAGATTTCTTCATCTCCCCGGTATTCTGACCCAGCGGCGGCTTCTGTTTTTTCCCCTACACACAAATCCGCTGTCCTCAATCAGTTTCAACAGCCTCAAACTATGTTATCTCCCATAAATACTAATGTTTTATCCCCTAAGAACGTTGAGCGCCCTCTGTTACATGCTTCATTTGGTGTCTCTTCTCCTGGGAGGATGTCTCCAAGAAGTGTGGAGCCAATCTCCCCCATGAATGCTCGTTTATCTGCCTTTGCTCAGCGCGAGAAACAGCAGCAACAGTTGCGCAGCCTTAGTTCAAGGGACCTGGGTTCCAACATTCCTGCCTCAGTTTTTGGCTGCCCTGGGAACTCTTGGTCCAAGTGGGGATCTCCTAATGGAAAAGTTAATTGGGCAACCAACAGAGATGAACAAGGAAGATTTCCAAGATCATCTTCATTTGAGCTTGGGAACAATGGGGAAGAGCCTGATCTATCTTGGGTCCAATCCCTGGTCAAGGAATCCCCACTAGAGATGCTGAAAGAGAAGTTGTGTGCCTCTGGCCCCTTGGCATCTACTGATGGACTGACTTCCAATTCTCAAATTGAATCCATTGATCATTCTGTTTTAGGAGCTTGGCTTGAGCAAATGCAGCTGGATAATCAGCTTTTAGTCTAA 2241 0.4552 MVGWEGKSRISEVFLYFAAHVAEKSKSPSTPSSSAIENKTKAEDMKQLTVHTEDSFSSLLELASNNDIEGFKQVLDRDASSINEVGLWYGRQNGSKQIVLEHRTPLMVAATYGSINVLKLILLNPEADVNLSHGMDKSTALHCAASGGSPNAVDAAKLLLSAGADLNCVDANGNRPVDVIVFPPKLPGMRATLEELLSYNSSDGSVSDSVAMSVNSLSPDSAAHLSSSDNGMPSSPSGSPSSPAASKFTDMLVGCTIEKKEYPIDPSLPDIKNSIYATDEFRMFSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGIFECWLHPAQYRTRLCKDGTNCNRRVCFFAHTAEELRPLYVSTGSAVLSPRSSASANVMDMAAALNLLPGSPSSVSSMSPSPFAQPISPSANGISHSSVPWPQPNVPVLHLPGSSFQSSRLKSSLSARDIPPEDWNVLPDFDGQQHLLNDLSCFSQPHPGAALVSRPGLSMTLTPSNLEELFSAEISSSPRYSDPAAASVFSPTHKSAVLNQFQQPQTMLSPINTNVLSPKNVERPLLHASFGVSSPGRMSPRSVEPISPMNARLSAFAQREKQQQQLRSLSSRDLGSNIPASVFGCPGNSWSKWGSPNGKVNWATNRDEQGRFPRSSSFELGNNGEEPDLSWVQSLVKESPLEMLKEKLCASGPLASTDGLTSNSQIESIDHSVLGAWLEQMQLDNQLLV 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00478 746 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 325 345 IPR000571 GO:0046872
Bach13g00478 746 Gene3D - 320 383 - -
Bach13g00478 746 SMART ANK_2a 54 84 IPR002110 GO:0005515
Bach13g00478 746 SMART ANK_2a 101 131 IPR002110 GO:0005515
Bach13g00478 746 SMART ANK_2a 136 168 IPR002110 GO:0005515
Bach13g00478 746 ProSiteProfiles Ankyrin repeat profile. 101 134 IPR002110 GO:0005515
Bach13g00478 746 PANTHER UNKEMPT FAMILY MEMBER 61 696 IPR045234 -
Bach13g00478 746 ProSiteProfiles Ankyrin repeat region circular profile. 136 170 - -
Bach13g00478 746 FunFam Zinc finger CCCH domain-containing protein 66 278 346 - -
Bach13g00478 746 Gene3D - 19 182 IPR036770 -
Bach13g00478 746 MobiDBLite consensus disorder prediction 221 245 - -
Bach13g00478 746 ProSiteProfiles Zinc finger C3H1-type profile. 325 347 IPR000571 GO:0046872
Bach13g00478 746 SUPERFAMILY Ankyrin repeat 51 180 IPR036770 -
Bach13g00478 746 ProSiteProfiles Ankyrin repeat profile. 136 171 IPR002110 GO:0005515
Bach13g00478 746 Pfam Ankyrin repeats (3 copies) 86 169 IPR002110 GO:0005515
Bach13g00478 746 SMART c3hfinal6 355 378 IPR000571 GO:0046872
Bach13g00478 746 SMART c3hfinal6 320 346 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00478 Bach-Chr13 10057720 10060420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00478 37 741 C2H2 Transcription Factor Family AT5G12850 54.444 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach13g00478 Ank_2 9.6e-09 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00478 - - gmx:100792574 1075.46