Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00465 ATGAAGAGGTTAAGGTCCAGCGACGATCTCCATTCGTACGGAGATAAAAATGCCTGCAAGGATTCGAATCTGAACCGGTCGTCGTCTTCTTCTCACCGGGAGTTTTACTACAAATCCGATAATGTGCGGAAGGACTTGCTCTCTTCGTCGTCTTCTTCGTCTCGGTATGATAGGGATCGAACGGTGAATGATGATCGAGAGAGTTCCAGGTTGGTGCGGAAGCGATCAGACCATGAATTTGAGGGCTTTGATAGGAGAAAAGGGTTTGAGAGATATAGGGATGGTGGTAATAGTAGAGGGTATAGTATGCACAGGTCTGAGAGTTTTGGTGGGTCGAGAAGGGAATTTCCGAAGGGCTTTCGGTCAGAGAGGGACCGGTCACGGCGTGAGGGCAGTGTGTCATCATGGCGGAGATTTGGTGGGATGAAGGATTTTGATGACACTGGTAGAGGCAGTAGGGTTGGATTGGAAGATAAAGGGGTACGGTCACCGAAGGGTTTGAGGGATGTAAAGTCCCCAACTTGGTCAAAAGATTCTGAGAGTGAGCAATCGAAGATCAGGTCTCCACCAAGAGGGTGGAGAGATTCCAAGTCCAAGTCCAAGTCACCAACTTGGTCCAAGGATTCAGAGAGTGAACAATCGAAGTGTGCTGAGGTGAAGAAAACCGAGGAGGTGCAAGTTGAGAGTGGGAGTAGTAGCGAAATGGAGGAAGGGGAACTTGAACCTGAACCCATGCCTGAAGCTGAACCAGATACTGCTCCTAAAGACGCACCTGAAAATGAAGGCCGGGCTTCTACCCGTTTGGATACTGATGAAAAGGAAGCGCTGAGTGAATGCCAGTTCAATGATACGGGTATTACTGTGGAGGAAACATCAGGTTTATCAGATAAGCAACAGATAGAAGCAAATGAGGATTCCAGTTCTGGTGAGAAAGATGCAGTGAAAGAAGTCGATATGCAGCCAGTGCCAGATATGCAGATTGATCCAGCTGATAAGATACACTTTGCTGGGAGTGAAACTGAAACTGTAGCTCACGATGATGACAAGGAAAAACAATCTCTGAAGGCTGATATTGAATGCAAGGAGGAAACTCAGAAGGTTGCAGATATGGAGAAGCCTTTGCTTAATGAAGAGGAGCATGAGCAGGACAAGGATGTAGATCTCGAAACCAGACCAATTCTTGACAATCCGGAGTTCCAAGACCGCCACGAAGCTTCAACAGAAAAAGAAGTGCCTGAAGTACTTAGAGAAATGATTGAGTGTGTGCCCAGCAATGCAAAGGATAAGGGTAAAAGTGTCTCTGTCACACCTACTGATGTTGTTCTTTCTTCAGAAGATGGTCTTTGGATAGATAGAGGATTGAGAGATCTTACAACTTGCTCAGACGATGCTATGGAAGGTCCTAGCACAAGGGGGTTTGAATTATTTTCCAGATCTCCTGTTAGGAAAGTAGAGAAAACAGATCAATCCAATCTCAAGAAACAGAAGGATGCAAGTCTTGGAATGGAGCAGCTTGATCTATCTCTTAGCTTGCCAAATGTTTTATTACCTATTGGTGCTCAAGAGACAACACAAGTCCCAGGATCCCCTAGTCAAGCTCGGAGTGTACAGTCCTTAAGTAACACATTTCGTACTAACTCTGATGGATTTACTGCATCAATGTCATTTTCTGGTTCTCAATCATTTTATCACAATCCAAGCTGTTCTCTAACACAAAATTCAGTGGATTATGAACAATCTGTTGGCAGTCGCCCCTTATTTCAGAATATGGATCAACTTGCTCAAGGAGGTTGTCTAGGGCAGCCTCAAAATGATCTCAAACTGAAAGAATTTTCTTTTGGTCAGATAACTTCAGTGAATGGAAATGGCTCTTTTTACCAGCCTCAAGCATCATGTGGCATTTCGGATGGTCAAGCCATGAAAGGTCAACATTCCAGGGTTCTAGAAGGGAGCTCAAAAATGGCCAATGGACTTGACAGGCAATTGAGTTTTCATAAGCAGTTGTCAGGCCAGTCAAGGCGCCATGATGATGTTAGATCTCCTTCACAGAGTGTTGGGTCTCATGACATTGGATCAAGTTACAGTTTTGACAAGAGGGAAATGAGAGACAAAAGTAATGGTAGTTTACATCGAACTACTAGTCAGAAGGAACAAGAGCAATTTCTGATGAGTGGAGCTGATTTTGTCGAGACAATCATTGCAAGGATAGTTTATGATCCGGTGCATGCAATGGCAAAGAAATTTCATGAAATGACCGGACAATCCACTGCCTGTTTGAAAGAGGGCATTCGTGATATCTTGGTCAATGCAGACAAACAGGGTCAAGTACTTACTTTTCAGAAAGTCCTGCAGAGCAGGTCTGATATAACCTTGGAGGTTCTTCTAAAGTCCCATCGAGTTCTTTTGGAAATTCTGGTTGCTTTGAGAACTGGTTTAACTGATTTTCTTCAGGTAGACAACAGCATCTCATCTTCTGATTTAGCTGAGATTTTTCTGAACTTAAGATGTAGGAATTTTACATGTAGTAGTCAGTTGCCTGTGGATGAATGTGATTGCAAGGTTTGTGTGCAGAAGAATGGTTTTTGTAGGGAATGTATGTGTCTAGTGTGCTCTAAGTTTGACATGGCATCAAATACATGTAGTTGGGTGGGGTGTGATGTTTGTCTACATTGGTGCCATGCGGACTGTGGACTAAGGGAATCTTATATTAGAAATGGACATAGTGCTACTGGGGCGCAAGGGACAACTGAGATGCAGTTTCACTGTATTGCCTGTGATCACCCCTCTGAGATGTTTGGCTTTGTCAAGGAGGTTTTCCAAAATTTTGCAAAACAATGGTCAGTTGAAGCATTTCGCAAGGAGCTCGAATATGTGAAGAGAATTTTTTCTGCCAGCAAGGACATGAGAGGGAGAAAGTTGCATGAGATTGCCGATCAAATGCTGTCAAGGTTGGCAAATAAGTCTAATCTTCCAGAAGTTTACAGTCACATCATGTCTTTCCTTGCGGATGGTGACTCTTCCAAATTAGCCATGACACTGACTCCTGGAAAGGAGCCAGTTAAAGAAAACAAAGTGGTAGCTGGGCCCAGCCAGGAAGCTGCATGGTTGAAATCTGGTTGTTTGGAAAAGCCACCTCCGTTAGAAAGGCCAGTAAGCATGCTTCCTATGTATGACAAAAATGATAAAAGAACTCAGATGCAAGACTTGCAGATGAGTGTCCCAAAGGACTTCTATTTTGATGAATTGGAGAGTATAGTAAAAATTAAACAGGCAGAGGCTAAAATGTTTCAAACACGTGCTGATGATGCAAGAAGAGAGGCTGAAGGGCTCAAACGCATTGCTCTTGCAAAGAATGAAAAGATTGAAGAAGAGTATACAAATAGAATAGCAAAGTTGAGATTGGGGGAGGCTGAGGAGATACGTAAACAGAAACTTGAAGAACTGCAGACTGTAGAAAGAGCACATCTGGAGTACTTCAACATGAAAATGAGAATGGAGTCAGATATTAAGGATCTCTTGTCAAAAATGGAAGCTACAAAAAGGAGCCTTGCCATGTGA 3558 0.4345 MKRLRSSDDLHSYGDKNACKDSNLNRSSSSSHREFYYKSDNVRKDLLSSSSSSSRYDRDRTVNDDRESSRLVRKRSDHEFEGFDRRKGFERYRDGGNSRGYSMHRSESFGGSRREFPKGFRSERDRSRREGSVSSWRRFGGMKDFDDTGRGSRVGLEDKGVRSPKGLRDVKSPTWSKDSESEQSKIRSPPRGWRDSKSKSKSPTWSKDSESEQSKCAEVKKTEEVQVESGSSSEMEEGELEPEPMPEAEPDTAPKDAPENEGRASTRLDTDEKEALSECQFNDTGITVEETSGLSDKQQIEANEDSSSGEKDAVKEVDMQPVPDMQIDPADKIHFAGSETETVAHDDDKEKQSLKADIECKEETQKVADMEKPLLNEEEHEQDKDVDLETRPILDNPEFQDRHEASTEKEVPEVLREMIECVPSNAKDKGKSVSVTPTDVVLSSEDGLWIDRGLRDLTTCSDDAMEGPSTRGFELFSRSPVRKVEKTDQSNLKKQKDASLGMEQLDLSLSLPNVLLPIGAQETTQVPGSPSQARSVQSLSNTFRTNSDGFTASMSFSGSQSFYHNPSCSLTQNSVDYEQSVGSRPLFQNMDQLAQGGCLGQPQNDLKLKEFSFGQITSVNGNGSFYQPQASCGISDGQAMKGQHSRVLEGSSKMANGLDRQLSFHKQLSGQSRRHDDVRSPSQSVGSHDIGSSYSFDKREMRDKSNGSLHRTTSQKEQEQFLMSGADFVETIIARIVYDPVHAMAKKFHEMTGQSTACLKEGIRDILVNADKQGQVLTFQKVLQSRSDITLEVLLKSHRVLLEILVALRTGLTDFLQVDNSISSSDLAEIFLNLRCRNFTCSSQLPVDECDCKVCVQKNGFCRECMCLVCSKFDMASNTCSWVGCDVCLHWCHADCGLRESYIRNGHSATGAQGTTEMQFHCIACDHPSEMFGFVKEVFQNFAKQWSVEAFRKELEYVKRIFSASKDMRGRKLHEIADQMLSRLANKSNLPEVYSHIMSFLADGDSSKLAMTLTPGKEPVKENKVVAGPSQEAAWLKSGCLEKPPPLERPVSMLPMYDKNDKRTQMQDLQMSVPKDFYFDELESIVKIKQAEAKMFQTRADDARREAEGLKRIALAKNEKIEEEYTNRIAKLRLGEAEEIRKQKLEELQTVERAHLEYFNMKMRMESDIKDLLSKMEATKRSLAM 1185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00465 1185 MobiDBLite consensus disorder prediction 18 35 - -
Bach13g00465 1185 CDD PHD_OBE1_like 866 925 IPR047578 -
Bach13g00465 1185 Pfam Coiled-coil region of Oberon 1058 1173 IPR032535 -
Bach13g00465 1185 MobiDBLite consensus disorder prediction 248 278 - -
Bach13g00465 1185 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 1183 IPR004082 -
Bach13g00465 1185 MobiDBLite consensus disorder prediction 140 227 - -
Bach13g00465 1185 MobiDBLite consensus disorder prediction 108 133 - -
Bach13g00465 1185 MobiDBLite consensus disorder prediction 57 100 - -
Bach13g00465 1185 Coils Coil 1134 1154 - -
Bach13g00465 1185 Coils Coil 1162 1182 - -
Bach13g00465 1185 Pfam PHD - plant homeodomain finger protein 836 959 IPR032881 -
Bach13g00465 1185 MobiDBLite consensus disorder prediction 1 410 - -
Bach13g00465 1185 MobiDBLite consensus disorder prediction 334 410 - -
Bach13g00465 1185 MobiDBLite consensus disorder prediction 303 318 - -
Bach13g00465 1185 MobiDBLite consensus disorder prediction 1 16 - -
Bach13g00465 1185 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 873 893 IPR004082 -
Bach13g00465 1185 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 786 801 IPR004082 -
Bach13g00465 1185 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 801 816 IPR004082 -
Bach13g00465 1185 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1119 1141 IPR004082 -
Bach13g00465 1185 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1080 1100 IPR004082 -
Bach13g00465 1185 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 827 848 IPR004082 -
Bach13g00465 1185 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 747 769 IPR004082 -
Bach13g00465 1185 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 946 965 IPR004082 -
Bach13g00465 1185 MobiDBLite consensus disorder prediction 666 718 - -
Bach13g00465 1185 MobiDBLite consensus disorder prediction 693 710 - -
Bach13g00465 1185 Coils Coil 1104 1124 - -
Bach13g00465 1185 MobiDBLite consensus disorder prediction 280 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00465 Bach-Chr13 9924655 9928930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00465 836 984 PHD Gene Family AT5G57380 24.832 8.50e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00465 - - qsa:O6P43_029561 1523.06