Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00416 ATGGCAACCATGGGAAAGAGGAACTTCTCTGAAATTTTATCTGAGCTGATAGTTTTAGCTGATGAGGTTGCTTCATTGGCAAAGAAATCTGAAATTGAAAGAGATGTTTTAACTGAGTTTGCCATGTTGGTTCAGAAGTTTGCAGCATTCTTATATGATTTGAGAGACAAGAACACAATCATGGACAAGCCAGCTATTAGAAAATCGTTGGAATCCCTTGAGAATGGGCTTAGGCGTGCTAAAGCTTTGACAAAAAGCCCCAATTTGAAGCAACCCATCAAACAGATTGTGGACATTACACATGATCTAGGCCGATCATTAGGGATGTTGCTTGTTGCCAGCCTTGAAGTGTCCGCAGATTTTCGAGAAAAGCTTGGAGCATTGCAGAAACAGTTCATGAATGTGAGGTTTGGTGAAGATATGAGTCTTACTTCAAGTCCAAGATCAGAGCTTTCCGTTGATCTCATGAGGGCTGAATGGGAAATAGAAGATGTCCATGAGGAAATAACTGATATTAGTATTGATGATTTTGTATGGAAACTCAAGCATGGTAATGATGAAGAATTTACCCTTGCTATTATGAGACTAATGGAATTCATCAAAGGTGAAAACATGGACAATGGCTTGTTTAATGAAGAAGCACTTGTTACCATTCTTTTCAATCGTCTAGGTTCAAGTAAGGCGGACAATAGGCTTATAATCATTCGATTATTAAGAAGCATTGCTTTGGACAATGATGAGAAGAAGGAGAAGATGGCAGATGCTGAGTTTTTATCAGCAGTGGTGAAGTCTCTGTCACGGGATGTAGAAGAGAGGAGGGAGGCCGTTGGGCTGTTGCTGGACCTCTCTGACATTCAGGCAGTTCAGCGTCGAATTGGTAGAATTCAGGGGTGTATTGTGATGTTAGTATCTATCCTTAATGGAGATGATCCTGTTGCTTCATGTGATGCAGCAAAGTTATTGGATGCATTGTCAAGCAATACTCAAAATGCACTCCATATGGCAGAGGCTGGTTACTTTAGGCCACTAGTGCAGTATCTGAAAGAAGGGTCTGACATGACTAAGATTCTTATGGCAACTGCACTTTCTAGGTTGGAGCTCACTGATAATTGCAAAGCTTCTCTCGGAGATGATGGGGCAATTGAGCCCCTTGTCAAAATGTTTAGTGTAGGGAAGCTTGAGTCCAAGTTATCTGCTCTGAATGCTTTGCAGAATTTGTCCAGCTTGACAGAAAATGTACAACGACTGATCACATCAGGCATTGTGTCCCCTCTGCTTCAACTTCTTTTCTCTGTTACATCTGTACTCATGACTTTACGGGAGCCTGTATCAGCCATTCTTGCAAGAATTGCTCAGTCAGAACCTGTTCTTGTTAAGCCAGATGTGGCTCAGCAGATGCTTTCGCTTTTGAATCTTTCTAGCCCTGTGATTCGAGGTCATCTTTTAGAAGCCCTAAATGGCATTGCTGCCCATCCAAGTGCGTCAAAAATAAGAAGAAAAATGAAGGAAAGAGGTGCACTTCAGCTTCTTTTACCCTTTCTGATGGAAACTAACACTAAGATTAGAAGCAAGGCTTTGAACTTGCTGTACACCCTCTCTACTGATATGACGGAAGAGTTGACAGAACAACTTGATGAAACTCATTTTTTGAACGTTGTCAATATTATCTCATCATCAACATCAGACAGTGAGAAAGCTACTGGTATTGGGATACTGAGCAATCTCCCTATTAGTAATAAAAAAGTGACTGACATGTTGAAGAGGGCAAACTTGCTACCCATTTTGGTCACCATTATGAGTTCATGCACAGGAATCAATTCACCCACATCATGCAGGTTGGCAGAGAATATTGCTGGTGTTTTAATTGGGTTTACAAATTCTTCTGACAAGAAACTACAACTTTACTCAGCAGATCATGGGGTGATTCCTTTGCTTGTAAAATTGCTCTCTAGTGGCTCACCAATTGCAAAATCCAGAGCTGCAACCTCACTTGCTCAATTATCACAGAATTCTCTGTCCATTCGGAGGCCTAGAAAATCACGGTGGCTGTGTCTTCCTCCCTCTGCGAATTCCTATTGCGAAGTTCACGATGGCTTTTGCTTCGTTAACACATTTTGTCTGGTCAAAGCTGGTGCTGTTTCTCCTCTTGTTCAAATATTGGAAGACAAGGAGAGGGAAGCAGGTGAAGCAGCTCTTAATGCCCTTTCAACTCTAGTGCAAGATGAAATTTGGGAAGGTGGTGCCAATTGCATAGCCAAAATCTCAGGTGTTCAGGCTATTATAAAAAATTTAGAAGTTGAAGATGTGAAGGTTCAAGAGAAAGCACTATGGATATTGGAGAGAATATTCAAGGTTGAAGAACACAAAGTAAAATATGGAGAATCTGCTCAGGTGGTTCTCATTGACCTGGCCCAGAAGGGTGACTCAAGATTGAAGTCAACAGTTGCAAAAATATTAGCAGAGCTGGAGCTTTTACAAGTTCAATCTAGTTACTTCTGA 2499 0.4122 MATMGKRNFSEILSELIVLADEVASLAKKSEIERDVLTEFAMLVQKFAAFLYDLRDKNTIMDKPAIRKSLESLENGLRRAKALTKSPNLKQPIKQIVDITHDLGRSLGMLLVASLEVSADFREKLGALQKQFMNVRFGEDMSLTSSPRSELSVDLMRAEWEIEDVHEEITDISIDDFVWKLKHGNDEEFTLAIMRLMEFIKGENMDNGLFNEEALVTILFNRLGSSKADNRLIIIRLLRSIALDNDEKKEKMADAEFLSAVVKSLSRDVEERREAVGLLLDLSDIQAVQRRIGRIQGCIVMLVSILNGDDPVASCDAAKLLDALSSNTQNALHMAEAGYFRPLVQYLKEGSDMTKILMATALSRLELTDNCKASLGDDGAIEPLVKMFSVGKLESKLSALNALQNLSSLTENVQRLITSGIVSPLLQLLFSVTSVLMTLREPVSAILARIAQSEPVLVKPDVAQQMLSLLNLSSPVIRGHLLEALNGIAAHPSASKIRRKMKERGALQLLLPFLMETNTKIRSKALNLLYTLSTDMTEELTEQLDETHFLNVVNIISSSTSDSEKATGIGILSNLPISNKKVTDMLKRANLLPILVTIMSSCTGINSPTSCRLAENIAGVLIGFTNSSDKKLQLYSADHGVIPLLVKLLSSGSPIAKSRAATSLAQLSQNSLSIRRPRKSRWLCLPPSANSYCEVHDGFCFVNTFCLVKAGAVSPLVQILEDKEREAGEAALNALSTLVQDEIWEGGANCIAKISGVQAIIKNLEVEDVKVQEKALWILERIFKVEEHKVKYGESAQVVLIDLAQKGDSRLKSTVAKILAELELLQVQSSYF 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00416 832 Gene3D - 212 335 IPR011989 -
Bach13g00416 832 Gene3D - 689 829 IPR011989 -
Bach13g00416 832 SMART arm_5 629 669 IPR000225 GO:0005515
Bach13g00416 832 SMART arm_5 746 784 IPR000225 GO:0005515
Bach13g00416 832 SMART arm_5 327 367 IPR000225 GO:0005515
Bach13g00416 832 SMART arm_5 368 408 IPR000225 GO:0005515
Bach13g00416 832 SMART arm_5 700 740 IPR000225 GO:0005515
Bach13g00416 832 SMART arm_5 245 284 IPR000225 GO:0005515
Bach13g00416 832 SMART arm_5 494 534 IPR000225 GO:0005515
Bach13g00416 832 SMART arm_5 409 452 IPR000225 GO:0005515
Bach13g00416 832 Gene3D - 336 679 IPR011989 -
Bach13g00416 832 SUPERFAMILY ARM repeat 375 787 IPR016024 -
Bach13g00416 832 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 166 832 - -
Bach13g00416 832 SUPERFAMILY ARM repeat 167 491 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00416 Bach-Chr13 9251947 9255052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00416 215 832 U-box Gene Family AT1G76390 28.936 7.35e-45 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00416 K08332 - gmx:100791453 1178.7