Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00384 ATGAGCATGTTAGGCCTTAGAGACTTGGTTCTCATAGCTCCAACCCCTTCTCTTCACCAACAGGGCCAACCCGTTTCAGCAGAGCACCATTCTAATCTTCCTATGCCTTCTTCTGCAGCTCTCAGTGTTGGACTTGGCTTTTTCCCTCTTCTAACTGCCACTCCGTGTGTTCCACAGAGTAATGGGGTTGAAGAATGTGGTAACACCAGCAATCCCAATCAGTGGAACTTTAAGATTTGCCCAGAAGTGAATCCTGCGAGAAAAGGAACGGCCAATGTGGAAGATGAAAATTACAAACAGTTGGGTGACGTTGAGGAAAACGGTGAATTACGGGTATGCCAGGATTGTGGGAACAGGGCCAAGAAAGATTGCAACTTTAGAAGATGTAGGACTTGTTGTAAGGGACGTGGGTATGATTGTAGTACTCACTTGAAGAGCACGTGGGTACCCGCGACACGGCGGAGGGAGCGGCAGATGATGGTGGTTCCAGGTGGTGGAAGTGGCGGTGCTGCTGATATTGGAGGTGCTTCTTCTGGGTCTCCTCCTGGTGCTAAGAGGCCCAGACCTTTTGGGCTATTGCCGAATCCTGCAACTACTTCTCACAGTTCTACCTCTAATGCTACCACACCAAGAAGCTTGGATAATAGTTCTTATCACCAAGATGCTACCTTCAAACAATCTTTACCTGGTCAAGTTAGAGCCCCTGCTGTGTTTAGGTGCCATAGAGTGTCTGCTATTGGTAATAGAGAAGATGAATTTGCTTACTTGGCCACAGTGCATATTAGTGGCCATGTGTTTAAAGGGTTTCTGTATGATCATGGTGCTGGTGGGAAAATTTCAGTACTGAACTTGGAAAACAATAGCAATGGAAAGAACAAGGAATCTTCTTTAATGGGGGCTCCAACCAATGTCTTCCCTGCTTCTGCTTCTGGTAGCTGA 939 0.4696 MSMLGLRDLVLIAPTPSLHQQGQPVSAEHHSNLPMPSSAALSVGLGFFPLLTATPCVPQSNGVEECGNTSNPNQWNFKICPEVNPARKGTANVEDENYKQLGDVEENGELRVCQDCGNRAKKDCNFRRCRTCCKGRGYDCSTHLKSTWVPATRRRERQMMVVPGGGSGGAADIGGASSGSPPGAKRPRPFGLLPNPATTSHSSTSNATTPRSLDNSSYHQDATFKQSLPGQVRAPAVFRCHRVSAIGNREDEFAYLATVHISGHVFKGFLYDHGAGGKISVLNLENNSNGKNKESSLMGAPTNVFPASASGS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00384 312 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 76 295 IPR007818 GO:0003700|GO:0006355
Bach13g00384 312 Pfam Domain of unknown function (DUF702) 112 275 - -
Bach13g00384 312 MobiDBLite consensus disorder prediction 195 218 - -
Bach13g00384 312 NCBIfam putative zinc finger domain, LRP1 type 112 154 IPR006510 -
Bach13g00384 312 MobiDBLite consensus disorder prediction 165 218 - -
Bach13g00384 312 MobiDBLite consensus disorder prediction 290 312 - -
Bach13g00384 312 NCBIfam LRP1 C-terminal domain 228 274 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00384 Bach-Chr13 8852411 8853453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00384 1 305 C2H2 Transcription Factor Family AT5G12330 40.854 1.77e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Bach13g00384 DUF702 1.7e-56 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00384 - - qsa:O6P43_018565 395.971