Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00380 ATGTGTTCTTTTTACTGTAGAAAATTTAGGTTCATTTTCATATTTGTTTCATTCAGCAGCTCATCGTATAATAGAGAAATTTTGTTGATAGATAAAAATGATGAAGGCGAACGAGAAGATTTGGAGCTGCCTTTTTTTGACCTTGATACAATAGCTCATGCCACTAATAACTTCTCAAGTGACATGAAACTTGGTCAAGGTGGCTTTGGGCCTGTATACAAGGGAACATTAGTGAGTGGGCAAGAGATTGCTGTAAAAAGACTTTCAAAGAGATCTGAACAAGGATTGAAAGAATTTAAGAATGAAGTTATATTGTGTGCCAAAATTCAACATCGAAATCTTGTTAAGGTTCTTGGTTGCTGCATTCACAGGAATGAGAAATTGCTCGTCTACGAGTACATGCCTAACAAAAGCCTAGATTGGTTTCTTTTTGATCCAACAAAGAGAAAACTTCTTGATTGGTCTCAACGTGTTCATATTATATACGGAATTGCTCGGGGTCTTCTTTATCTTCATCAAGATTCTAGATTAAGGATCATCCACAGAGATCTTAAAGCAAGTAATGTTTTACTAGATAAAGAGTTAAACCCAAAAATTTCAGATTTTGGTCTAGCACGAATGTTTGGAGGAGATGAGATTGAAGGAATAACAAGAAGAGTAGTTGGAACATATGGTTATATGGCACCTGAATATGCCATTGATGGGATGTTCTCGATCAAATCTGATGTATTCAGCTTTGGCATATTACTATTGGAGATAGTGAGTGGAAAGAAAAATAAAGGTCTTACCTATGCTGGCCATGGTCTTACTCTTATTGGACATGCATGGAGGTTGTGGAATGAGGGTGTCCCATTGGAATTTCTTGATCCTTTTTTGAAGCTCTCATGTGTTGTATCAGAAGTATCACGCTGCATCCATATTGGTCTTTTATGCGTTCAACAGCATCCTCATGATAGGCCTAACATGGCATCAGTGGTTGTGATGTTGAACAATGAGACTACTTTCCCTCTCCCCAAAGAGCCTGGTTTCTTCTTGGAAAGAACCTCTTCCGCTAAAGATCAATTGTCTTCTAGCATGCAGAGACCTTGTTCCACCAATGAGATCACTGTCTCACAGCTAGACCCTAGATAG 1131 0.382 MCSFYCRKFRFIFIFVSFSSSSYNREILLIDKNDEGEREDLELPFFDLDTIAHATNNFSSDMKLGQGGFGPVYKGTLVSGQEIAVKRLSKRSEQGLKEFKNEVILCAKIQHRNLVKVLGCCIHRNEKLLVYEYMPNKSLDWFLFDPTKRKLLDWSQRVHIIYGIARGLLYLHQDSRLRIIHRDLKASNVLLDKELNPKISDFGLARMFGGDEIEGITRRVVGTYGYMAPEYAIDGMFSIKSDVFSFGILLLEIVSGKKNKGLTYAGHGLTLIGHAWRLWNEGVPLEFLDPFLKLSCVVSEVSRCIHIGLLCVQQHPHDRPNMASVVVMLNNETTFPLPKEPGFFLERTSSAKDQLSSSMQRPCSTNEITVSQLDPR 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00380 376 Gene3D Phosphorylase Kinase; domain 1 24 133 - -
Bach13g00380 376 SMART serkin_6 58 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00380 376 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 134 336 - -
Bach13g00380 376 CDD STKc_IRAK 64 331 - -
Bach13g00380 376 Pfam Protein tyrosine and serine/threonine kinase 61 327 IPR001245 GO:0004672|GO:0006468
Bach13g00380 376 Gene3D Transferase(Phosphotransferase) domain 1 134 335 - -
Bach13g00380 376 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 133 - -
Bach13g00380 376 MobiDBLite consensus disorder prediction 353 376 - -
Bach13g00380 376 SUPERFAMILY Protein kinase-like (PK-like) 42 361 IPR011009 -
Bach13g00380 376 Pfam Domain of unknown function (DUF3403) 330 376 IPR021820 GO:0004674
Bach13g00380 376 ProSiteProfiles Protein kinase domain profile. 58 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00380 376 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 22 376 - -
Bach13g00380 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00380 Bach-Chr13 8817387 8818870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00380 30 376 Receptor kinase-like Gene Family AT4G23150 55.114 9.24e-138 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bach13g00380 PK_Tyr_Ser-Thr 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00380 - - cit:102616779 494.582