Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00348 CTGAGATGAGTTTTTGATGGATTTTATATTCGTGTGATTATTTTGTCTCTACATCATGGTAGCAATGATTCTGTTCTAAAGTTTCGATTTTTCCTTGTGGGTTTCATTCATTTTCCGTCTAATCCTTATCTTCCAATTTGATGCCCCAAATCTGGTACTATGAGGAAGAAGCTCGATACCCGTTTTCCTGCCGCTCGAATAAAGAAGATAATGCAAGCTGATGAGGATGTTGGGAAGATAGCGCAAGCAGTCCCTGTTCTAGTTTCCAAGTCTCTGGAACTATTTCTGCAAGATCTTTGTGATCGTACTTATGAAATAACTCTTCAAAGAGGAGCAAAGACCATGAATGCATTGCATTTAAAACATTGTGTACAAAGCTTTAACGTCTTTGATTTTCTGAGGGATATAGTCAGCCGGGTTCCTGACTATGGTCATGGCCATGGCCATGGCCACAGCCATTCTGAGGCTGGAGATGACCGAGCCCATGCCCATCCAAAGAGAAGGAAAGCAGCTGGTGATGATTGCAATGACAGTGATGAAGAGCCAAGGAGGAACAAGATCCTTGAAGTGAGCCACACTGGCGGTACTGGTAGGGGAAGAGGTCGAGGTAGAGGAAGAGGCCGTGGACGTGGACGTGGGGCTCGAGCTGCAGAAAGGGAGATCCATCATCAGGAGGTTGAATCTGAGCCCTGTACTCCTGCTCACCATGCCAGCAAACCTAATCCTAGTACAGGTGTGGTGATAGAAAATGGTTCAGAGTCTAAAGAGTTATCAAAGGAGAATGTGACTCCTGATGAAGGAACTCAGTCTCTCCTCAACATTGATCTGAATGCCAACGTGAATGAAAACGAGGAGAAAAATGCCAGCACAGGCACGGCCACAGCTCCTCCCCCAGTGCCGGAACCTGCCACTGAGACTAAACACGAAGAATACCCAGGATGGTCTCTTTCTGATGTGGACAAGATGGCCATTGACTCTATGCAGCTTGTGCATCTTGATAGACCATTAGAAGAGTATGAGGAGGATTATGATGAAGAAGGGTAGATACGGAAACTCTTCGGGGGGAAATGATCAATGGAAAGGAGCAGAAGAGTAAAGTAAATTCTGGTGCTATCACGACTCTCCAAAACATACCTCAAGCTCTGGCCAAAAAGATCATCTAAATCACTTTTCATTTTTCTGGTTTGTATCTGTTAGCACGTTCTGATGCCTGGTAACGTTATTTGTGCCAACGCCTCAAGGAGAAGGAATGAGTACAGGTATTTTGGTGGATGTAAACTACGGCAGTTTATAAGAACAAAGATCATGCCCAAAAAAGAAACATTATCTAATCAATAGAAAT 1342 0.4419 MRKKLDTRFPAARIKKIMQADEDVGKIAQAVPVLVSKSLELFLQDLCDRTYEITLQRGAKTMNALHLKHCVQSFNVFDFLRDIVSRVPDYGHGHGHGHSHSEAGDDRAHAHPKRRKAAGDDCNDSDEEPRRNKILEVSHTGGTGRGRGRGRGRGRGRGRGARAAEREIHHQEVESEPCTPAHHASKPNPSTGVVIENGSESKELSKENVTPDEGTQSLLNIDLNANVNENEEKNASTGTATAPPPVPEPATETKHEEYPGWSLSDVDKMAIDSMQLVHLDRPLEEYEEDYDEEG 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00348 294 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Bach13g00348 294 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Bach13g00348 294 MobiDBLite consensus disorder prediction 158 179 - -
Bach13g00348 294 SUPERFAMILY Histone-fold 3 89 IPR009072 GO:0046982
Bach13g00348 294 MobiDBLite consensus disorder prediction 91 194 - -
Bach13g00348 294 MobiDBLite consensus disorder prediction 91 135 - -
Bach13g00348 294 MobiDBLite consensus disorder prediction 231 261 - -
Bach13g00348 294 FunFam dr1-associated corepressor homolog 1 86 - -
Bach13g00348 294 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00348 Bach-Chr13 8503809 8506999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00348 1 279 CCAAT-HAP5 Transcription Factor Family AT3G12480 50.342 6.93e-75 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bach13g00348 CBFD_NFYB_HMF 3.4e-20 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00348 K21752 - gmx:100810093 332.413