Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00347 ATGGCGGATAATTCCCCCTCTGAGGCCTCTAGCATATCAGCAGCTTCTGAAGGCAATTCGAGCAAAGACATGGCTGAGAACCAGAAGATGAGCCCGAGAGTGAGTGAGGAAGCTCAGGAATCTGAACCTGATAAGGCTTTTGATTCAAGCCATCATGTTTTGCTGGATTTCACGAAGGTTTCCAGTGATGATTCAGCTCATGGGCCGAAGGTGGAACATGATTTCTTGAACCCTGGTACTCTGGCTTCAGCAAACAATGAAGAAACAAATGAGAACAAACGTAAGAGGACATCGGAGCCAAAGGTTTTCCCTTGTACTTTCTGCAAGAGGGAGTTCTCTTCTTCCCAATCTTTGGGAGGGCACCAAAACGCCCATAGGCAAGAGAGGGCACTTGCCAAAAGGCGTCAAGGGATTGATGTTGGTCCTTATGGACACCCACAGTACATTCCTTATTACCGCCTCTCCACACACCCCCTTTATGGATCATACAATAGTGCACTTGGCGTTCGAATGGAGTCAATGATTCACAAGCCCTCTTATGCTTGGACCTCGCCATGCTATAGGTTTGGCCATGGTGCAGCTGGGTGGTCAAGGCAATCTCTGCTGAACTCACCAACCCTTAATGGCCTAAGGGTGGATGGTTTGCAAGCACATGACGGTGGTGGGTATGGACCTGTTGGCAACTCTTATACTTCAAGACTAGAGGAAGGTGGTCCTCTTGGCCACTTTGGTGAGTATTCTTCAAGTGTTGCTGCTACCAATTCAAGCTCTGGCCTGAACTTGCTAGCTTTAATTGCAAGTAGAGATCATCAAATGAAGCAAGAAGAACCCCCCATAGCCAATGATCCTGAATCCTCCCTGCTTGATTTGTCACTTAAGCTTTAG 885 0.4768 MADNSPSEASSISAASEGNSSKDMAENQKMSPRVSEEAQESEPDKAFDSSHHVLLDFTKVSSDDSAHGPKVEHDFLNPGTLASANNEETNENKRKRTSEPKVFPCTFCKREFSSSQSLGGHQNAHRQERALAKRRQGIDVGPYGHPQYIPYYRLSTHPLYGSYNSALGVRMESMIHKPSYAWTSPCYRFGHGAAGWSRQSLLNSPTLNGLRVDGLQAHDGGGYGPVGNSYTSRLEEGGPLGHFGEYSSSVAATNSSSGLNLLALIASRDHQMKQEEPPIANDPESSLLDLSLKL 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00347 294 Pfam C2H2-type zinc finger 102 128 - -
Bach13g00347 294 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 2 294 IPR044246 GO:0009788
Bach13g00347 294 ProSiteProfiles Zinc finger C2H2 type domain profile. 103 130 IPR013087 -
Bach13g00347 294 Gene3D Classic Zinc Finger 82 139 - -
Bach13g00347 294 ProSitePatterns Zinc finger C2H2 type domain signature. 105 125 IPR013087 -
Bach13g00347 294 MobiDBLite consensus disorder prediction 29 52 - -
Bach13g00347 294 MobiDBLite consensus disorder prediction 1 98 - -
Bach13g00347 294 MobiDBLite consensus disorder prediction 1 28 - -
Bach13g00347 294 SUPERFAMILY beta-beta-alpha zinc fingers 100 130 IPR036236 -
Bach13g00347 294 MobiDBLite consensus disorder prediction 272 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00347 Bach-Chr13 8494336 8495220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00347 74 210 C2H2 Transcription Factor Family AT5G10970 38.849 4.84e-21 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach13g00347 zf-C2H2_6 1.4e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00347 - - gmx:102663393 226.868