Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00343 ATGCACTACCAATTTCCCTTTACCATCACATTCCTGTGCATCCTTTGCTTGGCTGCAGGCCAAAACACAAGCAATTCACAAGACCAAGCAGCACTAGATTACCGTTATGCTTGTCTAGACCAATCCTCCACTCCCCCCTCCAGCACATACCAAGACAACCTCAACAACCTCATCACTTCCCTCTCAGCTGATGCAGCTAGCAGCAATGGTTTTGGTAACAGAACTTCCGGCAATCCTGATCAAAGCAACAGCACAGTTTATGGCCTGTACCTTTGCCGGGGTGACGTAAACACAAGCCTTTGCCATTCATGTGTACAAAACTCAAGCAGATTGATAGGGCAGCACTGTCCTAACAATGCATCAGCTGTCTTATGGTACCCCTTTTGCCTTCTGAGGTACTCAAACCAGAATTTCTTCGCCAAACTCACCATCACACCTAGGATTCCCATGTTTGACGCGACACAGAATTTCACCAGTGCCGGAGAATTTGATAGTGATGCGAGGATTTTGATGAATGGATTGATACAAACCGGGGCAGAGACGCCATTGATGTTTGGGACACATATGTTCAACATAAATGGGACTCAGAGAAGGTATGGTTGGGTTCAGTGCAGCAGAGACATTACCAGTGAGGACTGCAGAACATGTTTGAGCTACATGCTTGAAGACGTTGAGAATTGCTGTGAGGAGAAGAAGGTGTGGCGTGTCTTTTCTCCTAGTTGTATCGTCATGTATGAGACCCAACCTTTCTTCTTGGATAACACGGACCCTGAAGCACCTGCACCTCAACCAGCCAAAAGTGGAAGTAACAAAAGGAGAAGAACCATAATCATCAGTGTTGCGAGTGGAGTAGCAGTAGTAGCAGCTCTATCTGCTATCAGCATTTACTACTGGTGCTTGAAAAGGAGAAAAGTCAAACAAACTATGCAGGAAGAAGGGTTAAATCCATTTTCCAAAGAGCAGCGTGAGAGGGAAGACTCAGTGCATGGTGATCTTCCTACAATGCCTCTTAGTATTATCCTACAAACTACTGGTAACTTTTCCAGTGAGCATAAATTGGGTCAAGGTGGATTTGGTCCTGTTTATAAGGGTGTTCTGCCAGATGGAAGGCAAATTGCTGTTAAAAGGCTCTCAAAAACTTCAGGTCAAGGTGCTGAACAAGCAATCTTCCTTTTTTCCGAGTTCCAGTTAAGACATAATGGGAAAGGAGAAGGAGGTATTGATAAGCGTGTTATTGAGAGATTTGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCCTTCAAGTATGCTTGGGTTCTTGACAAGCTAAAGGCTGAGCGTGAAAGAGGTATTACAATTGATATTGCCCTGTGGAAGTTTGAGACAACCAAGTATTACTGCACAGTCATTGATGCTCCTGGCCATCGTGATTTTATTAAGAACATGATTACCGGCACATCTCAGGCTGACTGTGGAGTCCTTATCATTGATTCCACAACTGGTGGCTTTGAAGCTGGTATTTCCAAGGATGGTCAGACCCGTGAGCATGCTCTCCTTGCTTTCACTCTTGGAGTGAGGCAGATGATTTGCTGCTGTAACAAGATGGATGCCACTACACCAAAGTACTCCAAGGCCAGATATGATGAAATTGTGAAGGAAGTGTCTTCCTACCTGAAGAAGGTTGGTTACAACCCTGACAAGATTCCCTTTGTTCCCATCTCTGGGTTTGAAGGTGACAACATGATTGAGAGGTCCACCAACCTTGACTGGTACAAGGGTCCTACCCTACTTGAGGCTCTTGACCAGATCAATGAGCCCAAGAGGCCCTCAGACAAGCCTCTCCGTCTTCCACTCCAGGACGTGTACAAGATTGGAGGTATTGGCACTGTGCCTGTGGGACGTGTTGAGACAGGTATCGTGAAGCCTGGTATGGTGGTGACTTTTGGTCCCACTGGTCTGACAACTGAAGTTAAGTCTGTTGAGATGCACCACGAGGCTCTCCAGGAAGGTCTCCCAGGTGACAATGTCGGTTTCAATGTTAAGAATGTTGCTGTTAAGGATCTCAAGCGTGGTTATGTAGCTTCCAACTCCAAGGATGACCCTGCCAAGGAGGCTGCAAACTTCACATCCCAAGTCATCGTCATGAACCACCCTGGCCAGATTGGAAATGGCTATGCCCCTGTGCTGGATTGCCACACTTCCCACATTGCTGTCAAGTTTGCTGAGATCTTGACCAAGATTGACAGACGATCTGGTAAGGAGATTGAGAAGGAGCCCAAATTCTTGAAGAATGGTGATGCTGGTTTCGTCAAGATGATTCCCACTAAGCCCATGGTGGTTGAAACTTTCGCCACGTATCCTCCACTGGGTCGTTTTGCCGTGAGGGACATGCGTCAAACTGTGGCTGTCGGAGTCATCAAGAGTGTTGAGAAGAAGGATGCCACTTCAGCCAAGGTCACCAAGGCTGCACAGAAGAAGGGTGGCAAATGCACTCTGATTCCGCCGTCTGACCGGCCAGAGGTGTCAGTCACCCTCAAGATCGGATTTGAACTGTTCGGTGTGAGAGAAATGGAGGACTATGATCTGCCAGGACAAAGAAAGGATATGAAACAGAAAGGAAGAAATGTTGTCTGGTCAATTGCAATGGATAAGTGTCTGATTGAGGCACTGGCTGTTCAGGCAAAAAATGGGAACAAAATAGACAAATGTTTCAATGAAAATGCTTACACTGCTGCTTGTGTAGCTGTGAACACTCGTTTCAACTTGAGTCTGAATAATCAGAAAGTTATCAACCGTCTGAAGACAATTAAGAAGAGGTATAAAGTAATGAAAGACATGCTAAGTCAGGATGGTTTCTGGTGGAATCCAACTACAAAGATGATTGAGTGTGAAAGCGATGAGCTTTGGAAGAGATACGTTGCAGCACACCCTGATGCTAGAGGCCTACGTGGAAAGCCAATAGAGATGTATGATGAACTAAAAATTGTTTGTGGCAATTATCAAGCTCCTAGTCGTTGGGCTAAGATGAAGGATGGAAGCCATCTAATGGAGATAAAGCATTGTGACGATGAATCAGCTTCCTTTGTCTCTCCAACTTCAGAAGGCAAGAGTGAGACAGATGGAACGGAGTCATATACTGGACCTCAAGAGTATGGCCAGATGCCAGATGGTTGTCAAGAGACTCCTGCCTTCCAGCCTTTTAGACAACTTCCGAAACGGCCTCGTGGTTCAGATGCTCTTCAGGATGCATTGATGGCAGTAGCATCAAGCATCCGACGCTTGGCGGATGCAATGGAGCAAAGCAAATACTCAATTGATGCCACTGAACTATTACAGGCAGTGATGGAGATAGATGGGTTAGAAGAGGGTAAACAGATGTATGCTTTTGAATATTTGAATGCTGATCCTGTCAAAGCCCGAGCCTTTCTGACATACGATGCTCGAATGAGAAAGATATACCTGTTTAGGCAATTCTGGTGGTGGTGA 3465 0.4586 MHYQFPFTITFLCILCLAAGQNTSNSQDQAALDYRYACLDQSSTPPSSTYQDNLNNLITSLSADAASSNGFGNRTSGNPDQSNSTVYGLYLCRGDVNTSLCHSCVQNSSRLIGQHCPNNASAVLWYPFCLLRYSNQNFFAKLTITPRIPMFDATQNFTSAGEFDSDARILMNGLIQTGAETPLMFGTHMFNINGTQRRYGWVQCSRDITSEDCRTCLSYMLEDVENCCEEKKVWRVFSPSCIVMYETQPFFLDNTDPEAPAPQPAKSGSNKRRRTIIISVASGVAVVAALSAISIYYWCLKRRKVKQTMQEEGLNPFSKEQREREDSVHGDLPTMPLSIILQTTGNFSSEHKLGQGGFGPVYKGVLPDGRQIAVKRLSKTSGQGAEQAIFLFSEFQLRHNGKGEGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCGVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVRQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGIVKPGMVVTFGPTGLTTEVKSVEMHHEALQEGLPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIVMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKEIEKEPKFLKNGDAGFVKMIPTKPMVVETFATYPPLGRFAVRDMRQTVAVGVIKSVEKKDATSAKVTKAAQKKGGKCTLIPPSDRPEVSVTLKIGFELFGVREMEDYDLPGQRKDMKQKGRNVVWSIAMDKCLIEALAVQAKNGNKIDKCFNENAYTAACVAVNTRFNLSLNNQKVINRLKTIKKRYKVMKDMLSQDGFWWNPTTKMIECESDELWKRYVAAHPDARGLRGKPIEMYDELKIVCGNYQAPSRWAKMKDGSHLMEIKHCDDESASFVSPTSEGKSETDGTESYTGPQEYGQMPDGCQETPAFQPFRQLPKRPRGSDALQDALMAVASSIRRLADAMEQSKYSIDATELLQAVMEIDGLEEGKQMYAFEYLNADPVKARAFLTYDARMRKIYLFRQFWWW 1154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00343 1154 CDD EF1_alpha_II 603 693 - -
Bach13g00343 1154 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 405 622 IPR027417 -
Bach13g00343 1154 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 434 449 IPR031157 -
Bach13g00343 1154 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 699 802 IPR009001 -
Bach13g00343 1154 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 405 603 IPR000795 GO:0003924|GO:0005525
Bach13g00343 1154 Gene3D - 398 599 IPR027417 -
Bach13g00343 1154 PANTHER TRANSLATION FACTOR 405 806 - -
Bach13g00343 1154 SUPERFAMILY Protein kinase-like (PK-like) 331 391 IPR011009 -
Bach13g00343 1154 Pfam Elongation factor Tu domain 2 621 686 IPR004161 GO:0005525
Bach13g00343 1154 SUPERFAMILY Translation proteins 604 694 IPR009000 -
Bach13g00343 1154 FunFam Elongation factor 1-alpha 696 803 - -
Bach13g00343 1154 Pfam Salt stress response/antifungal 43 136 IPR002902 -
Bach13g00343 1154 Pfam Salt stress response/antifungal 155 247 IPR002902 -
Bach13g00343 1154 FunFam Elongation factor 1-alpha 400 599 - -
Bach13g00343 1154 NCBIfam translation elongation factor EF-1 subunit alpha 405 806 IPR004539 GO:0003746|GO:0005525|GO:0006414
Bach13g00343 1154 CDD EF1_alpha_III 696 799 - -
Bach13g00343 1154 Gene3D - 31 138 IPR038408 -
Bach13g00343 1154 Gene3D - 149 250 IPR038408 -
Bach13g00343 1154 FunFam Cysteine-rich receptor-like protein kinase 28 34 137 - -
Bach13g00343 1154 Gene3D Phosphorylase Kinase; domain 1 309 397 - -
Bach13g00343 1154 Pfam Myb/SANT-like DNA-binding domain 871 965 IPR024752 -
Bach13g00343 1154 Pfam Elongation factor Tu GTP binding domain 423 595 IPR000795 GO:0003924|GO:0005525
Bach13g00343 1154 MobiDBLite consensus disorder prediction 1019 1039 - -
Bach13g00343 1154 FunFam Cysteine-rich receptor-like protein kinase 10 148 250 - -
Bach13g00343 1154 Gene3D Translation factors 696 803 - -
Bach13g00343 1154 CDD EF1_alpha 405 600 - -
Bach13g00343 1154 ProSiteProfiles Gnk2-homologous domain profile. 145 250 IPR002902 -
Bach13g00343 1154 FunFam Elongation factor 1-alpha 602 689 - -
Bach13g00343 1154 Pfam Elongation factor Tu C-terminal domain 695 802 IPR004160 -
Bach13g00343 1154 Gene3D Translation factors 602 689 - -
Bach13g00343 1154 PRINTS GTP-binding elongation factor signature 521 530 IPR000795 GO:0003924|GO:0005525
Bach13g00343 1154 PRINTS GTP-binding elongation factor signature 477 488 IPR000795 GO:0003924|GO:0005525
Bach13g00343 1154 PRINTS GTP-binding elongation factor signature 441 449 IPR000795 GO:0003924|GO:0005525
Bach13g00343 1154 PRINTS GTP-binding elongation factor signature 461 471 IPR000795 GO:0003924|GO:0005525
Bach13g00343 1154 ProSiteProfiles Gnk2-homologous domain profile. 32 138 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00343 Bach-Chr13 8456569 8470258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00343 405 813 Eukaryotic Initiation Factors Gene Family AT5G60390 95.355 0.0 817
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00343 K03231 - qsa:O6P43_005065 823.157