Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00334 ATGCATGGGTTTGATCTGAGTCCGAGTAAGAAAAGGTATGGGTTGGTGCAGTGTAGTAGAGACCTTACTAACGAAGAGTGTAATCAGTGTTTGACGGTTATGCTAGAGAAAGTTCCCCAATGTTGTGGGACAAAACAGGGGTGGCAGGTTCTGGCTCCTAGTTGTTTGATTAAGTATGATGATTTTATGTTCTATGACTTGAATACTCAAGCAACATCATCTTCTCCAACAACTGATCCAAAAACAGCCAAACAGGGAGGCACTAACAAGACAAGAACCTTGATCATTAGCATAATAAGTGCATTGGTGGCAGTAGCTCTATTAAGTTGCTCCATCTACTACTACTTGCGGAGGAAGAGAGTAAAAAAGGAGATCATGCTATCAGAGACCACCCCTATAATTTTCCTAGGCAATGTTCAAAGTGACAAGAATTCCTATGAAGACCTTCCCACTGTCCCTTTTGTTACAATTCAAGAGAATTTTGGATTGGCAAAGACATTTGAAAGAGGTCAAAATCAAGCCAATACTAAAAGAGTAATGGGTACTTATGGATATATGGCTCCTGAGTATGCTATGGAAGGATTATTTTCTGTAAAATCTGATGTTTTTAGTTTTGGAGTTCTTATATTGGAGATAATTTGTGGCCAAAAGAATAGTGGATTTTACCTCTCAGATCATGGTCAAAGTCTTCTTGTATATGTGAGTTTTCTTCTATCTTCTTACTAA 726 0.3829 MHGFDLSPSKKRYGLVQCSRDLTNEECNQCLTVMLEKVPQCCGTKQGWQVLAPSCLIKYDDFMFYDLNTQATSSSPTTDPKTAKQGGTNKTRTLIISIISALVAVALLSCSIYYYLRRKRVKKEIMLSETTPIIFLGNVQSDKNSYEDLPTVPFVTIQENFGLAKTFERGQNQANTKRVMGTYGYMAPEYAMEGLFSVKSDVFSFGVLILEIICGQKNSGFYLSDHGQSLLVYVSFLLSSY 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00334 241 Gene3D - 3 64 IPR038408 -
Bach13g00334 241 Pfam Protein tyrosine and serine/threonine kinase 160 216 IPR001245 GO:0004672|GO:0006468
Bach13g00334 241 ProSiteProfiles Protein kinase domain profile. 1 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach13g00334 241 Pfam Salt stress response/antifungal 10 60 IPR002902 -
Bach13g00334 241 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 160 231 - -
Bach13g00334 241 Gene3D Transferase(Phosphotransferase) domain 1 155 239 - -
Bach13g00334 241 SUPERFAMILY Protein kinase-like (PK-like) 160 217 IPR011009 -
Bach13g00334 241 ProSiteProfiles Gnk2-homologous domain profile. 1 64 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00334 Bach-Chr13 8246685 8249604 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00334 160 234 Receptor kinase-like Gene Family AT4G05200 61.333 3.75e-25 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bach13g00334 PK_Tyr_Ser-Thr 1.2e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00334 - - lja:Lj0g3v0351729.1 159.844