Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach13g00331 ATGAGTCTAACGGAAAATGAGATTGAAGATGAGGTGCTCCTTAAGGACCAGAGTGGATCAAAGTTGAATGATGAGGGTAATGGAGAAAGTGCTGGTGGAGTTATTCTGAAGAAAGGGCCCTGGACATCTGCTGAAGATGCTATTTTGGTGGACTATGTCAAGAAGCACGGGGAGGGGAACTGGAATGCTGTACAGAAGCACTCAGGCCTATCTCGTTGTGGCAAAAGCTGTCGACTGCGGTGGGCAAATCACCTGAGGCCAAATTTGAAGAAAGGGGCATTTACTGCAGAAGAAGAGCGGTTGATTGCTGAACTACACGCTAAGATGGGCAACAAATGGGCTCGCATGGCAGCGCATTTGCCTGGTCGTACAGATAATGAGATAAAGAACTACTGGAATACCCGGATAAAGAGGCGTCAACGGGTTGGTTTGCCACTTTACCCTCCTGAAGTGTGTTTTCAAGCATTGCAAGAGTCTCAGCATGGCCAAAGCTCTGCAGGAACTAATGATGGGGCTAGAGGAGATCATGGTTTCCTGCAGAAAAATAGTTATGAGATACATGATGCTATATTTGATAGTTTGAAGGCTAACCAGGGAATTTTACCTTACGTACCAGACCTTCCTAATATTTCTGCCAGTAACATTTTGCTGAAAGGTCTTGGTTCTTCTCAATACTGTAATTTTCTGCCATCAACATTGCCTCACCTTAAACGTCTTCGAGAGTCAACAATGCCATTACTTGGTTCCAATGTTATGAACAGAAATGGGTATTATCCATTTGAGCAATTTCAGAATAATGCCTCAAATAAGATTGCTCGATCATTTGGATTGCATTCTCTGCTTGATCCTGGTCCCTCCTCACAGAATTCACTTTCTTACGGCCATTCACTTTCAAATGGCAATTCCTCTACTTCTAAGCCAACTACTGAGGCTATGAAGATGGAGCTCCCTTCACTCCAATATCCAGAAACTGACCTAGGTAGCTGGGGCACATCTCCTCCCCCGCCTCCTTTAACTGAGTCAGTTGATGTTTTCATTCAGTCTCCGCCAAATAGTGCACTAGAGTCAGATAGTTCCTCACCACAGAATACTGGCCTCCTGGATGATATGCTTCATCAAGCAAAGACTATGAGCAGTTCAAAGAATCATTACTCTGACAAAAGTTCAAATTCATCCACTGCAACCCCTGGTGATGGAGCTGACAGTTCCACTTTTAACATGTGTGAGACAGAATGGGAAGACTACACTGAACATGTTTCTCCATTTGGTGCAACTTCAATGTTAAACGATTGCCCTGCTATTAGTGCCAATGGAAATTCATTGGGTGAACAACTACCGGCTCAAATGTTTAGTGGCAACATTGTGAAACCAGAACCTCTTGAGCAGGCTTGGACCCCTAATAGTGAAGATCAAACCATGTCCATGTTGGATATCAGTCGGCTAGATACATTGCTTGCTTCAGATTGGGTTGAGCAGAATTCAAGGAATAGCCAGAACCAAGGAGTCAGTACAGATGCTGTAGCAACCCTTCTCGGGGACGATTTAGCCACAGACTACAAGCAGATGTCAGCTGGAACTTCTACATCAAGTCAAGTATGGGGGCTTGGTTCGTGTTCATGGAATAACATGCCTGCTGTGTGTCAAATGCCAGATCTTCCTTAAAAGGACAGCCATATATGATATTGAAACCTTTATTGAAAACATTATTACACATTCACATTGATTTGAGCATGAGGTTGTCATGTCTTATTTCTCCTGAGGAAGGTCTGGTTTGGGTGTAATTTATGGTTTTAATGCCTGAATCTGGGACGGCCTTATTTCTGGCTTATAAATTCGTTGATTCTGTGCTGCATGTATTGTATACTGGTATAAACTCTCGGG 1881 0.4354 MSLTENEIEDEVLLKDQSGSKLNDEGNGESAGGVILKKGPWTSAEDAILVDYVKKHGEGNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGAFTAEEERLIAELHAKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRVGLPLYPPEVCFQALQESQHGQSSAGTNDGARGDHGFLQKNSYEIHDAIFDSLKANQGILPYVPDLPNISASNILLKGLGSSQYCNFLPSTLPHLKRLRESTMPLLGSNVMNRNGYYPFEQFQNNASNKIARSFGLHSLLDPGPSSQNSLSYGHSLSNGNSSTSKPTTEAMKMELPSLQYPETDLGSWGTSPPPPPLTESVDVFIQSPPNSALESDSSSPQNTGLLDDMLHQAKTMSSSKNHYSDKSSNSSTATPGDGADSSTFNMCETEWEDYTEHVSPFGATSMLNDCPAISANGNSLGEQLPAQMFSGNIVKPEPLEQAWTPNSEDQTMSMLDISRLDTLLASDWVEQNSRNSQNQGVSTDAVATLLGDDLATDYKQMSAGTSTSSQVWGLGSCSWNNMPAVCQMPDLP 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach13g00331 553 MobiDBLite consensus disorder prediction 286 344 - -
Bach13g00331 553 ProSiteProfiles Myb-like domain profile. 36 85 IPR001005 -
Bach13g00331 553 Pfam Myb-like DNA-binding domain 91 134 IPR001005 -
Bach13g00331 553 Pfam Myb-like DNA-binding domain 38 85 IPR001005 -
Bach13g00331 553 CDD SANT 40 85 IPR001005 -
Bach13g00331 553 SMART sant 37 87 IPR001005 -
Bach13g00331 553 SMART sant 90 138 IPR001005 -
Bach13g00331 553 MobiDBLite consensus disorder prediction 376 405 - -
Bach13g00331 553 FunFam MYB-related transcription factor 37 90 - -
Bach13g00331 553 Gene3D - 37 90 - -
Bach13g00331 553 MobiDBLite consensus disorder prediction 1 34 - -
Bach13g00331 553 Gene3D - 93 139 - -
Bach13g00331 553 ProSiteProfiles Myb-like domain profile. 86 136 IPR001005 -
Bach13g00331 553 FunFam Transcription factor GAMYB 93 139 - -
Bach13g00331 553 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 140 IPR017930 -
Bach13g00331 553 MobiDBLite consensus disorder prediction 286 311 - -
Bach13g00331 553 CDD SANT 93 134 IPR001005 -
Bach13g00331 553 SUPERFAMILY Homeodomain-like 37 132 IPR009057 -
Bach13g00331 553 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 85 IPR017930 -
Bach13g00331 553 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 10 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach13g00331 Bach-Chr13 8162255 8165852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach13g00331 35 546 MYB Transcription Factor Family AT3G11440 45.318 8.59e-132 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach13g00331 Myb_DNA-binding 5.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach13g00331 K09422 - qsa:O6P43_029762 761.911